Anaerocolumna chitinilytica: bsdcttw_10050
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Entry
bsdcttw_10050 CDS
T07655
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
acht
Anaerocolumna chitinilytica
Pathway
acht03410
Base excision repair
acht03430
Mismatch repair
acht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
bsdcttw_10050 (recJ)
03430 Mismatch repair
bsdcttw_10050 (recJ)
03440 Homologous recombination
bsdcttw_10050 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acht03400
]
bsdcttw_10050 (recJ)
DNA repair and recombination proteins [BR:
acht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
bsdcttw_10050 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
bsdcttw_10050 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
bsdcttw_10050 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Histone_HNS_N
Motif
Other DBs
NCBI-ProteinID:
BCJ97964
UniProt:
A0A7I8DKW3
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All DBs
Position
1199502..1201277
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AA seq
591 aa
AA seq
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MEKWVLRNKKADFESIMQKHSISECLARLIVNRGLLQEGDIDLYLNPDYSRICTPYGMKD
ITKACEILEDKINRSLPIRIVGDYDVDGISSTYILYKALTLCGARVDYEIPDRIKDGYGI
NEQIIDAAFEAGIDTILTCDNGIAALAQVQKAKQLGMTVIITDHHDIPYIMEEEKKRYLL
PEADAVVNPKQEECEYPFKQLCGAAVAYKLMEVLFKSNGIDEAELIPLREIVAIATVCDV
MELTGENRILVKKGLELLRKTENLGLRALMEMNGIALENLTSYHLGYVIGPCLNAGGRLD
TAKKGLRLLLAESREDARKQAEELKNLNDLRKQMTEEGLFGAVSMIEGSGLKEDKVLVVY
LQECHESLAGIIAGRLREKYNKPAIVLTKAHEMVKGSGRSIEKYNMHEELTRVAEHLTKF
GGHPMAAGMSLTIEAIEPFRSSLNKNTILTAEDLIPKVVIDIVLPLGLITEEMIEELKVL
EPFGKGNEKPLFADRSLSVLKLSVIGKNKNVIKLLVRNQYGKEMEAMYFGDTSGFLEGLY
DNYGKTEVERAFTHRENKIKLSLTYYPTINEYNGNRSIQIIIQNYLYEKAE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagtgggtactaaggaataaaaaagcagattttgaatctattatgcaaaagcat
agtatcagtgaatgtcttgcgaggttgattgtaaacagagggctgcttcaggaaggggat
atcgatttatacctaaatccagactacagcaggatttgcacaccttatggtatgaaggat
attacaaaggcctgtgaaatattagaggataaaataaatcgttcacttccaattcggata
gtaggggattacgatgtggatggaatctcttccacttacatactctataaggcattaacc
ctttgcggggccagggtggattatgagataccggaccgtatcaaagacggatatgggata
aatgagcagataattgatgctgcctttgaagctggaatagataccatattaacctgtgat
aacggaattgctgccttagcacaggtacaaaaggcaaagcagcttggaatgacagttatt
ataaccgatcatcatgatattccttacataatggaggaggagaagaagaggtatctgctg
ccggaagcagatgcagtagttaatccgaagcaggaggagtgtgagtatccgtttaagcag
ttatgtggggcagctgtcgcttataagctcatggaagttctgtttaaaagcaacgggata
gacgaagcagaactaatacctttgcgggaaatcgttgctatagccacagtctgtgatgta
atggaattaacaggagagaaccgtatcctggtaaaaaagggtttggaacttcttagaaaa
accgaaaatcttggcttacgggcacttatggaaatgaacggaattgccttggagaattta
acttcttatcacttgggatatgtcatcggtccttgtctcaatgcaggcggaaggctggac
acagctaaaaaggggttgaggcttcttttggcagagagccgggaagatgccaggaagcaa
gcagaagagttaaagaatctgaatgatttgagaaagcagatgacagaggaagggttgttt
ggagccgtttccatgatagaaggctccggtttaaaagaagataaggtattagttgtttat
cttcaggaatgtcatgaaagtctcgcgggaattatagcaggaaggttaagggaaaagtac
aataaaccggccattgtattaaccaaggctcatgagatggtaaaaggctccgggcgttct
atcgaaaagtataatatgcacgaagaacttaccagagtggcggaacatctcacgaagttt
ggaggtcatcctatggcagcgggtatgtcattgaccatagaagcgatagaaccttttcga
agcagtctaaataagaatacaattttaactgcggaagacttgattcccaaagtcgtaatt
gatatagtactgcccttaggattaattacagaggaaatgattgaagagctaaaggtctta
gagccttttggaaaaggaaatgaaaaacctttgtttgcggatagaagtctatctgtgtta
aaactttcagtaatcggaaaaaataaaaatgttattaagctgctggtaagaaaccaatat
ggaaaagaaatggaagctatgtattttggtgatacatcagggtttcttgaaggcctttat
gataattacggcaaaactgaagtggagcgtgcctttacacatagagaaaacaagataaag
ctgtcactgacttattatcctactataaatgaatacaatggaaaccgtagtattcaaata
attatacagaattatctttatgaaaaggcagagtaa
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