Anaerocolumna chitinilytica: bsdcttw_25580
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Entry
bsdcttw_25580 CDS
T07655
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
acht
Anaerocolumna chitinilytica
Pathway
acht03030
DNA replication
acht03430
Mismatch repair
acht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
bsdcttw_25580 (holA)
03430 Mismatch repair
bsdcttw_25580 (holA)
03440 Homologous recombination
bsdcttw_25580 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acht03032
]
bsdcttw_25580 (holA)
03400 DNA repair and recombination proteins [BR:
acht03400
]
bsdcttw_25580 (holA)
Enzymes [BR:
acht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
bsdcttw_25580 (holA)
DNA replication proteins [BR:
acht03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
bsdcttw_25580 (holA)
DNA repair and recombination proteins [BR:
acht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
bsdcttw_25580 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
FHBP_C
Motif
Other DBs
NCBI-ProteinID:
BCJ99517
UniProt:
A0A7I8DP66
LinkDB
All DBs
Position
2981846..2982823
Genome browser
AA seq
325 aa
AA seq
DB search
MKNIKEHIRLGQFRPVYLLYGTESYLKRLYKDKLRTAILTDNNEMNYSYFEGKGVDILKV
REIAETLPFFSDKRLIIIENSGLFKNQNDLADYIKDIPETTHIVFVESEVDKRNRLFKAV
KDNGTISEMNSMDEANLKIWVATLLKQDAKKITEESILYLLSKTGTDMDNISNEVEKLIC
YTGDRDIVTSQDIEEVCTSQISGKIFLMVEAIGNKRQKQALDLYYDLLALKEKPMSIMFL
ISRQFNILLQVKNLLSLGFNNNSIAEKTGLMPFTIGKYVSQCKNFNEKTLKGALTYCVDM
EEQVKTGKMQDSIAVELIIVRFSAA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatatcaaagaacatataaggcttgggcagtttagacctgtatatctcctatat
ggcacagaaagttatctaaagagactgtataaagataaattaagaacagccatcctaacc
gacaacaatgagatgaattattcctattttgaaggcaaaggagtggatatactcaaggtt
cgggaaatagccgaaactctccctttctttagtgacaagcgtcttatcataattgagaac
agcgggctatttaaaaaccaaaatgatttggcagattatatcaaagatatccctgagact
acacatatcgtttttgtagaatcagaagttgataaaagaaatcgtctgtttaaagctgtg
aaagataatggaaccatatcggaaatgaacagcatggatgaagccaatctaaagatttgg
gttgcaacgctcctaaagcaggacgcaaagaagataacagaagaaagtattctctatctg
cttagcaagaccggaacagatatggataacatcagcaatgaagttgagaagttgatatgt
tataccggtgatagggatattgtaaccagccaggacattgaagaagtatgtacttctcag
atatccggcaaaatatttctaatggtagaagccatcggaaacaaaagacagaaacaggct
ttagacttatactatgacctgctggctctaaaagaaaagccaatgtccatcatgttccta
atatccagacagtttaatatcctacttcaggtaaaaaatctgctgtctttaggctttaac
aacaattccatcgctgaaaagaccggattaatgccatttaccattggaaaatatgtaagc
caatgtaagaattttaatgaaaagacattaaaaggagcacttacttattgcgttgacatg
gaagagcaagtcaagacgggaaaaatgcaggatagtattgctgttgagcttatcatagtt
cggtttagcgctgcttaa
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