Anaerocolumna chitinilytica: bsdcttw_29130
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Entry
bsdcttw_29130 CDS
T07655
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acht
Anaerocolumna chitinilytica
Pathway
acht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bsdcttw_29130 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acht03019
]
bsdcttw_29130 (pnp)
03016 Transfer RNA biogenesis [BR:
acht03016
]
bsdcttw_29130 (pnp)
Enzymes [BR:
acht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
bsdcttw_29130 (pnp)
Messenger RNA biogenesis [BR:
acht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
bsdcttw_29130 (pnp)
Transfer RNA biogenesis [BR:
acht03016
]
Prokaryotic type
tRNA degradation factors
bsdcttw_29130 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_KhpA-B
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
DUF6599
KH_5
Motif
Other DBs
NCBI-ProteinID:
BCJ99872
UniProt:
A0A7I8DNJ2
LinkDB
All DBs
Position
complement(3354770..3356857)
Genome browser
AA seq
695 aa
AA seq
DB search
MYKSFSMELAGRTLTVDVGRVAAQANGAAFMHYGDTVVLSTATASDKPREGIDFFPLSVE
YEEKLYAVGKIPGGFIKREGKASENAILTSRVIDRPMRPLFPKDYRNDVTLNNLVMCVDQ
DCSPELTAMLGSAIATAISDIPFDGPTASTMVGMVDGELVFNPTSAQREKSTLSLTVAST
KEKVIMIEAGAYELPEDKMIEAIFAAHELNQKVIAFIETIVADCGKEKHAYIKCDTPEEL
YADMVAFITPEAMEEAVFTDVKQVREGNIREITDKLTERYQETHPEWIPLLGEAIYKFEK
KTVRKMILKDHKRPDGREITQIRHLAAEVDILPRTHGSAMFTRGQTQVLTITTLGALAEI
QKLDGIDENEKTKRYMHHYNFPSYSVGETKPSRGPGRREIGHGALAERALVPVLPSEEEF
PYAIRTVSEVLESNGSTSQGSICASTLSLMAAGVPIKSMVAGISVGLVTGESDDDYIILT
DIQGLEDFFGDMDFKVAGTHKGITAIQMDIKIHGLTREIIEKAIRRTKEARTYILDDIMA
PCISSPRSEVGPYSPKIVQIKIDPAKIGDVVGQRGKTINAIIDQTGVKIDITDDGAVSVC
GVDSDSIQKAIKLIQTIVADFEEGQIFEGKVVSIKEFGAFIEFAPGKEGMVHISKISKER
IDKVEDVLTLGDVVKVVCLGKDKMGRISFSIKDVK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaagtttttccatggagcttgccggaagaacacttaccgttgatgtaggcaga
gtggcagctcaggcaaatggtgcagcatttatgcactacggtgataccgttgttttatca
acagcaacagcatctgacaaaccaagagagggaatagactttttcccgttaagcgttgaa
tatgaagaaaaattatatgcagtaggaaaaattcccggaggttttatcaaaagggaagga
aaagcttctgaaaatgcaattcttacctcacgtgtcatcgacaggcccatgagacctctt
tttcccaaggattacagaaatgatgtaacccttaataatcttgtaatgtgtgtggaccag
gactgtagccctgagcttaccgctatgcttggttccgctatcgcaacggcaatatccgat
attccctttgacggaccgacagcttcaactatggttggtatggttgatggtgaacttgtc
tttaatccgaccagtgcacaaagagaaaagtctacgttaagcttaaccgtagcttctaca
aaagaaaaagttatcatgattgaagccggtgcttatgaattaccggaagataagatgatt
gaagcaatttttgcagctcatgaattaaaccagaaagttattgcttttattgagacaatc
gttgctgactgcggtaaagagaaacacgcttatattaaatgtgatacaccggaagagctc
tatgcagatatggtggctttcattactcctgaggcaatggaagaagcagtttttaccgat
gtgaagcaggtaagagaaggcaatatccgtgaaattaccgataagcttacagagcgttac
caggaaacacatccggaatggataccgttacttggtgaagcaatatataaattcgagaag
aaaaccgtacgtaagatgattctaaaggatcataaacgtcctgatggccgtgaaattaca
cagataagacatctggcagcagaagttgatattcttccaagaactcatggctccgctatg
tttaccagaggacagacacaggttcttaccataacaacattaggtgctcttgcagaaatt
cagaagttagacggaattgatgaaaatgagaagacgaaacgttatatgcaccattataac
ttcccttcctactctgtaggtgagacaaaaccttccagaggaccgggaagaagagagata
ggacatggcgctttggcagagagagcgttagttccggtattgccaagcgaagaagagttc
ccttatgcaatccgtaccgtatccgaagtattagaatccaatggctccacttctcaggga
agtatctgtgcttcaacactttctcttatggcagcaggtgttcctattaagagcatggta
gcaggtatttccgtaggtcttgttaccggtgaatcagatgatgactacattatccttacc
gatattcaaggtcttgaagatttctttggggatatggactttaaagtagccggaacccat
aaaggtattactgcaatacagatggatattaagattcatggtttgacaagagagattatt
gagaaggctatcagacgtacaaaagaagcaagaacctatattctggatgatattatggca
ccttgtatcagcagtcctcgttctgaagttggaccttattcacctaagattgttcagatt
aagatcgatcctgccaagattggtgatgttgttggacaaagaggaaaaacgattaatgct
attattgaccagaccggtgttaagattgacattaccgatgacggtgccgtatccgtatgt
ggtgttgattctgacagcattcagaaagcaattaagttgatacagacaatcgttgcagac
tttgaagaaggacagattttcgaaggtaaagttgttagtatcaaagaatttggagctttt
attgaatttgcaccgggcaaagaaggtatggttcacatttccaagatttctaaggagaga
attgataaagtagaggatgttcttactcttggagatgttgttaaggttgtatgccttggt
aaagataaaatgggcagaatcagctttagtataaaggatgttaagtga
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