Anaerocolumna chitinilytica: bsdcttw_32600
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Entry
bsdcttw_32600 CDS
T07655
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
acht
Anaerocolumna chitinilytica
Pathway
acht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
bsdcttw_32600 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acht03019
]
bsdcttw_32600 (rny)
Messenger RNA biogenesis [BR:
acht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
bsdcttw_32600 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Meis_PKNOX_N
AllH
Motif
Other DBs
NCBI-ProteinID:
BCK00220
UniProt:
A0A7I8DPA4
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All DBs
Position
complement(3748756..3750312)
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AA seq
518 aa
AA seq
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MQDILPIIASILVTLLIAVPLVWKFAISYHVKVVEAKIGSAEEKAREIIDEALKTAETKK
REALLEAKEESLKTKNELEKETKERRAEVQRYEKRVLSKEETLDRKIEALEKKESRLSAK
EAELDKIKVEAEALHAQQLQELEKISGLTSEQAKEYLLKTVEDEVKHETAMLVKELESKA
KEEADKKAKDYVVTAIQKCAADHVAETTISVVQLPNDEMKGRIIGREGRNIRTLETLTGV
DLIIDDTPEAVILSGFDPIRREVARIALEKLIVDGRIHPARIEEMVEKAQKEVEVMIREE
GEAATLEVGVHGIHPELVRLLGKMKFRTSYGQNALKHSIEVAQLSGLLAGEIGVDIRMAK
RAGLLHDIGKSVDHEMEGSHIQIGVDLCRKYKESAIVINAVESHHGDVEPESLIACIVQA
ADTISAARPGARRETLETYTNRLKQLEDISNSFKGVDKSFAIQAGREVRIMVVPEQISDA
DMILLARDVSKQIESELEYPGQIKVNVIRESRVTDYAK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggatatattacctataatagcaagtatattagttaccctgctcatcgctgttcct
cttgtctggaaatttgctatttcctaccatgttaaggttgtagaagctaagattggttct
gctgaggaaaaagcaagggaaatcatagatgaagctttaaaaacagctgaaactaagaaa
agagaagccttacttgaagcaaaggaagagtctttaaagactaagaatgagttagagaag
gaaaccaaggaaagacgagcagaagttcaacgatatgagaaaagggttctgtcaaaggaa
gaaaccttagacagaaagatcgaagcacttgagaagaaagaatccagactttctgcaaaa
gaagctgagcttgataaaatcaaggtagaagcagaagcactacatgcacagcagctgcag
gaactggagaaaatttcaggacttacctccgaacaagcgaaagaatatcttttaaaaaca
gttgaagacgaagtaaaacatgaaactgcaatgttagttaaggaacttgaaagcaaagca
aaagaagaagcagacaaaaaggcaaaggactatgttgttaccgctattcagaaatgcgca
gcagatcatgttgcggaaactactatatccgttgtacagcttccgaatgacgagatgaaa
ggaaggataataggaagggaaggaagaaatatccgtaccttagaaacccttacaggagta
gatctaattatagatgataccccagaggctgttattttatccggcttcgatcctatcaga
agagaagtggcaagaattgcccttgaaaagctgattgtagatggaagaattcatcctgcc
agaattgaagagatggtggaaaaggctcaaaaggaagttgaagtcatgattcgtgaagaa
ggtgaagcggcaactctagaagttggtgttcatggaattcatccagaacttgtcagactt
ctcggtaagatgaagttccgtacaagttatggacaaaatgctttaaaacattcgattgaa
gtagctcagttatccggattacttgccggagagataggcgtagatatcagaatggcaaag
agagccggattactgcatgatattggtaaatctgttgaccatgagatggaaggctcacat
attcaaattggtgttgatttatgcagaaagtataaggaatcagcgattgttattaatgca
gtggaatcacatcatggtgatgttgaacccgaatccttaatcgcttgtattgtacaggct
gcggacaccatttcagctgcgagaccaggtgctagaagagaaacattagaaacatacaca
aacagattgaaacaattagaagatatctccaatagctttaagggagtagataagtcattc
gcaatacaagcaggcagagaagttcgtattatggtagtgccggaacagatttccgatgca
gacatgatattacttgcccgcgatgtatctaaacagattgaatctgaactggaatatccg
ggtcagattaaagtaaatgtaatcagggaatcaagggttacagattacgcaaaataa
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