Anaerocolumna chitinilytica: bsdcttw_42310
Help
Entry
bsdcttw_42310 CDS
T07655
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acht
Anaerocolumna chitinilytica
Pathway
acht03030
DNA replication
acht03430
Mismatch repair
acht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
bsdcttw_42310 (dnaE)
03430 Mismatch repair
bsdcttw_42310 (dnaE)
03440 Homologous recombination
bsdcttw_42310 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acht03032
]
bsdcttw_42310 (dnaE)
03400 DNA repair and recombination proteins [BR:
acht03400
]
bsdcttw_42310 (dnaE)
Enzymes [BR:
acht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
bsdcttw_42310 (dnaE)
DNA replication proteins [BR:
acht03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
bsdcttw_42310 (dnaE)
DNA repair and recombination proteins [BR:
acht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
bsdcttw_42310 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF5986
HHH_3
T2SSK
Motif
Other DBs
NCBI-ProteinID:
BCK01191
UniProt:
A0A7M3S9C3
LinkDB
All DBs
Position
complement(4872753..4876241)
Genome browser
AA seq
1162 aa
AA seq
DB search
MSFTHLHLHTEYSLLDGSGKIKEMVARIKELGMDSMAITDHGVMYGVIDFYKACKAEGIK
PIIGCEVYVAPGSRFDREAGASDERYYHLILLAENNIGYQNLMKIVSAGFLEGFYYKPRV
DYEILEKYSEGLIALSACLAGEVANYLRKGFYEEAKRAAYHYQQIFGEGNFFLELQDHGI
SEQADVNQGLLRLSSETGIGLVATNDVHYTMESDAQAHDILLCIQTQKKVSDENRMRYEG
GQYFIKSEEEMKKLFPYALNALENTHKIAERCNVTIEFGDYKLPKFDVPAGFGALEYLKK
LCYEGLKERYPESFEELLDRLNYEIDTISNMGFVDYFLIVGDFIKYARDNDISVGPGRGS
AAGSLVSYSLGITNIDPIKYNLLFERFLNPERLTMPDIDIDFCYERRQEVIDYVVRKYGK
DRVVQIVTFGTMAARAVIRDVGRAMDLGYARVDTVAKMIPMELGITIGRALEINRELKDL
YDSDEEIRYLIDMSLRLEGLPRHTSMHAAGVVISKAPVVEYVPVSRASDESVTTQFTMTT
LEELGLLKMDFLGLRTLTVIQNAVRLLNKKRSKEDLLDIDKIDYDDAAVYAMIASGKTEG
VFQLESSGMKSFMKELKPRNMEDIIAGISLYRPGPMDFIPKYIKGKNSEGNILYECPQLE
PILAPTYGCIVYQEQVMQIVRDLAGYSYGRSDLVRRAMSKKKASVMEKERYNFVYGNEEE
GVPGCMKNGISETVANHIFDEMTDFAKYAFNKSHAAAYAVVSYQTAYLKCYYPVEFMAAL
LTSVIDSAGKVAEYIFTCRQMGIKILPPDINEGDATFSVSDGAIRYGLSAIKGLGRPVIE
SVVREREAAGPFTSLKDFAERLSGKEVNKRTVESFIKSGAFDSLPGTRKQKMMVYVQVLD
EVAQNKKRNLTGQLSFFDFAEEEDKQELEINYPDIGEYLKEQLLALEKEVMGIYVSGHPL
ESYEELLKKNVTHSTLDFALDEETGEAKVEDGGTAVVGGIITGKTIKTTRNNSMMAFITL
EDMAGAVEIILFPKDYEKYKMDIYEDNKILVKGKIAVEEEKAAKLICQEIVPFADNPREV
WIKYKDKDSFVQDEQRLYGILSQFDGKDQVCIYLECEKAIKQLPKSKSIKAEDVLLTKLC
ETYGQDNIKVVEKSIEKARKKG
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgagttttacccatttgcatttacatacagaatacagtctgctggatggttccggcaag
ataaaagagatggtggcaagaatcaaggaacttggcatggacagtatggccataaccgat
catggtgttatgtacggcgtcattgatttttataaagcctgtaaggccgagggaattaag
cctatcattggctgcgaggtttatgtggctcccggttcccgttttgatagggaagcaggt
gcttctgatgagagatactaccatcttatattgttggcagagaataacataggttatcaa
aatctgatgaaaattgtatcagcaggttttttagagggcttttactataagccccgtgtt
gactatgaaatactggagaaatacagtgagggactgattgcccttagtgcctgtcttgca
ggtgaagtggcaaattatcttcgaaaaggcttttatgaggaagccaagagggcagcatac
cattatcaacagatcttcggcgaaggtaacttctttttagagctgcaggatcatggcata
tctgagcaggcagatgttaaccagggacttcttcggttaagcagtgaaaccggtattggg
ttagttgctaccaatgatgtgcattataccatggaaagtgatgcccaggctcatgatatt
cttttatgcattcaaacccagaagaaggtctccgatgagaaccgaatgaggtatgaaggg
gggcagtattttattaagtccgaggaagagatgaaaaagctctttccctatgctcttaat
gctttggaaaatacccataaaattgcagaaagatgtaatgtaaccatagaattcggcgat
tataagctgccgaaatttgacgtgcccgcagggtttggagccttagagtatcttaagaag
ttatgctatgaaggccttaaggagagatatccggaatcctttgaggaactcctagacaga
ttgaactacgaaatagatacgatctcaaatatgggttttgtagattactttttaatcgta
ggggattttataaagtatgccagggacaatgacatcagcgtaggaccgggacgaggcagt
gctgccggaagccttgtttcttactctcttgggataaccaatattgatcctatcaaatat
aatctgctctttgaaagatttttaaatccggaacgacttaccatgcccgatattgatatt
gacttctgttatgaaagaagacaggaagttatcgattatgttgttcgaaagtatggtaaa
gaccgtgtggtacagattgtaacctttggaactatggccgccagagcggtaatccgtgat
gtgggaagagctatggatttaggctatgccagagtagataccgtagctaagatgataccg
atggaacttggtattaccattggacgagcgctggaaatcaacagagaattaaaagaccta
tacgattccgatgaggaaattcgttatttaattgatatgtctttgcgtctcgaaggactg
cctaggcatacctccatgcatgcagctggagtagtaatcagtaaagcgccggttgtagaa
tatgtgccggtatccagagcatccgatgaatccgttactacccaatttacaatgactacg
ctggaagagctgggactcttaaagatggactttctgggacttcgtaccctgacagtcatc
caaaatgcagtccgcctcctcaataaaaaacgtagtaaagaagacttactggatattgat
aagatagattatgatgatgcagccgtatacgcaatgatagcttccggaaaaacagaaggt
gtattccagcttgaaagctccggaatgaagagcttcatgaaggaactaaaacccagaaac
atggaggatattatagcgggtatctccctttacagaccgggtcctatggatttcataccg
aaatacattaagggaaagaacagtgaaggcaatatattgtatgaatgccctcagctggag
ccgattcttgcaccgacttatggctgtatcgtataccaggagcaggttatgcagattgta
agggatctggcaggctacagctatggaagaagtgatttggtgcgtcgtgccatgtcaaag
aaaaaagcatcggtaatggaaaaggaaaggtataactttgtctacggcaatgaagaagaa
ggagtaccgggctgtatgaagaatggaatatcggaaacggtggcaaaccatatcttcgat
gaaatgacagactttgcaaagtatgcctttaataagtcccatgcagcggcttatgcagtg
gtttcctaccaaaccgcctatttgaaatgttattaccccgtagagtttatggcagccttg
ttaacttctgttattgatagcgcaggcaaagtggcagaatatatttttacctgccgccag
atgggaattaagatattacctcctgatattaacgaaggagacgcgacattctcggtatcc
gatggtgcaattcgttatgggctttctgctattaaaggccttggaaggccagttattgaa
agtgtggtaagagagagggaagcagcaggtcccttcacctccctgaaggattttgctgag
agactctccggtaaagaggttaacaaacgaacagtagaaagctttatcaaatccggtgcc
tttgacagtcttcccggaaccagaaagcaaaagatgatggtatatgttcaggtattggat
gaagtagcacagaataaaaagagaaatctgaccggacaactttccttttttgattttgcg
gaggaagaagataaacaggaactggagattaattatcctgatataggagaatacttaaaa
gagcagctactggctctggaaaaagaggttatgggtatatacgtcagcggacatcctctt
gaaagctacgaagaactattaaaaaagaatgtcacccattctacccttgactttgcacta
gacgaagaaaccggagaagctaaggtagaggatggcggaaccgctgtggttggtggtatc
ataaccggtaagactataaaaactacgcgaaataattccatgatggcctttatcaccttg
gaggacatggctggagcagttgagataatccttttcccgaaggattatgagaagtataaa
atggatatatacgaggataataaaatactggttaaaggaaagattgctgtagaagaagaa
aaagcagccaaacttatctgccaggaaattgtaccttttgcggacaacccaagggaagta
tggattaagtataaagataaagacagttttgtacaagatgaacaaagactttatgggatt
ttaagccaatttgatggcaaggatcaggtgtgtatttatctggaatgtgaaaaagccata
aaacagcttcccaaatcgaaaagtattaaggcagaagatgtattacttacgaagctatgc
gaaacttatggacaggataatattaaagtagtagaaaagagtattgaaaaagccagaaaa
aaggggtaa
DBGET
integrated database retrieval system
