Anaerocolumna chitinilytica: bsdcttw_43360
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Entry
bsdcttw_43360 CDS
T07655
Name
(GenBank) Lsa family ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
acht
Anaerocolumna chitinilytica
Pathway
acht02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
acht00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
bsdcttw_43360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acht02000
]
bsdcttw_43360
01504 Antimicrobial resistance genes [BR:
acht01504
]
bsdcttw_43360
Transporters [BR:
acht02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
bsdcttw_43360
Antimicrobial resistance genes [BR:
acht01504
]
Gene variants
Macrolide resistance genes
Transporters
bsdcttw_43360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
NACHT
AAA_15
AAA_22
RNA_helicase
KAP_NTPase
nSTAND_NTPase5
Pox_A32
NPHP3_N
AAA_23
Motif
Other DBs
NCBI-ProteinID:
BCK01296
UniProt:
A0A7M3S9M8
LinkDB
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Position
complement(5004596..5006119)
Genome browser
AA seq
507 aa
AA seq
DB search
MSQIMITEMSFSYKTFYEPIFEKVTLNLDTDWRLGLIGRNGRGKTTFLKLLHKEFLPDKG
TIKMEVNTELFPYENKVRYSLTMDVIKENIGGLRTLEDNLEDMEALGRYLELDGFSMESL
IKKEMYRMKLAEELLYRDFSLLSEGEKTKVLLIALFLRKDTYLLLDEPTNHLDIRGKKDV
AEYLKRKKGFLVVSHDRSFLDEVADHILAINKSDITLEQGNFTTWKRNKDLKDEFEARAG
ERLNREVRQLERHAKESRLWGGTANTQKYAFASHARTNGAKAFMGQAKRSEQQIMNKIEE
KKTLLLNYETAAKLEFEQLETEGTLLLKGKDIMYSYDGRELFYGLSFDIKKGDRIWVRGE
NGSGKSTLLKLISGKLSTRGFIRTEDLKITEALQEPLWREGYLKGFIKDGNGDDFEKLCR
LFDLPDSLFERPLETFSRGELKKIEIARALSMENHLILLDEPLNYMDLYFREQLESAVLA
INPTLVFVEHDEWFGEKVATKVITIGN
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaattatgataactgagatgagctttagctataaaactttttatgaaccaata
tttgaaaaagtaacccttaatcttgataccgactggagacttggtctaatcggaaggaac
ggaagaggaaagacaacctttttaaaacttcttcataaggagttcctgccagataagggt
acaataaagatggaagtaaatacagaattgtttccttatgaaaataaagtaaggtattct
ctgacgatggatgtaataaaagaaaacattggaggtttaagaaccttagaggataatctg
gaagatatggaagctctcggacggtatctggaacttgacggcttctcaatggagagcctc
attaaaaaagagatgtatagaatgaaactggcggaagaactgctttatcgggacttttcc
ctattatctgaaggagagaaaaccaaagtgctcctaattgctttgtttctgcgtaaagat
acctatcttttattggatgagccgacaaatcatctggatattcgagggaaaaaggatgta
gcggaatatctaaaacggaaaaagggctttctggtagtatcccatgacaggagtttcttg
gatgaggtggcagatcatatcctggcaattaataaatcggatattactctggaacaagga
aattttactacctggaaacggaataaagatttaaaggatgaatttgaagccagagcaggg
gagcggttaaatagggaagtcaggcagttggagcggcacgcaaaggagagcagactatgg
ggaggaactgccaatacccagaaatatgcctttgccagccatgcaagaaccaatggagct
aaggcttttatggggcaggcaaaacgctcggagcagcagataatgaataagatagaagaa
aagaaaaccctgctcctgaattacgaaacagcagcgaagctggaattcgaacagttggaa
acagagggaaccttattgcttaagggaaaggatattatgtattcctatgacggcagggaa
ctcttctatggtttgtcctttgatattaaaaagggggaccgcatctgggtaagaggagaa
aatgggtcagggaaatccaccttgttaaaactgatttccggaaagctttccaccagggga
tttatacggacggaagaccttaaaataacagaagccctccaggagcccctttggagagaa
ggatatttaaaagggtttataaaagatgggaatggtgatgattttgagaaactatgccgt
ctctttgacctgccggactctttgtttgaacgtccattagagacctttagcagaggagaa
ctaaaaaagattgaaatagcaagggcactttccatggaaaaccatctgatactattggat
gagccccttaattatatggatctctatttcagagaacaattagaaagcgcagtacttgct
atcaatccgactcttgtgttcgtagaacatgatgagtggtttggagaaaaagttgctaca
aaggttattactatcggtaactaa
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