Acinetobacter chenhuanii: ABLB96_04100
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Entry
ABLB96_04100 CDS
T11543
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
achu Acinetobacter chenhuanii
Pathway
achu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
achu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABLB96_04100 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achu03021
]
ABLB96_04100 (rpoB)
03400 DNA repair and recombination proteins [BR:
achu03400
]
ABLB96_04100 (rpoB)
Enzymes [BR:
achu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABLB96_04100 (rpoB)
Transcription machinery [BR:
achu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABLB96_04100 (rpoB)
DNA repair and recombination proteins [BR:
achu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABLB96_04100 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
XDO76662
LinkDB
All DBs
Position
836882..840970
Genome browser
AA seq
1362 aa
AA seq
DB search
MAYSYTEKKRIRKNFGKLPQVMEAPYLLSIQVDSYRTFLQGGKSPKNREDIGLQAAFRSV
FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR
EQEVYMGEMPLMTDNGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP
YRGSWLDFEFDAKDLVYVRIDRRRKLLATVVLRALGYNNEQVLNLFYEKVPVYLDMGSYQ
IDLVPERLRGEMAQFDITDNEGKVIVEQGKRINARHVRQMEASGLTKLSVPDEYLYERIT
AEDITLRDGEVIAANTLLSHEVMVKLAEGGVKQFNILFTNDIDRGSFVADTLRADTTTGR
EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ
KSREVEGILSHEDIIDVLRTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV
ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS
ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANDFGFLETPY
RRVVDGRVTDAVEYLSAIEEVGTVIAQADSAVDKDGNLTEEFVSVRHQGEFVRMPPEKVT
HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMEANVARD
SGVCVIANRGGAIEFVDASRIVIRVNEDEMIAGEAGVDIYNLIKYTRSNQNTCINQNVIV
NLGDKVARGDILADGPSTDMGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI
HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG
ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDDRALAIEKA
QLDSYRKDLKEEYKIFEEAARERVIRLLKGQDSNGGGSTKRGDKLSEDLLSGLELVDLLE
IQPADEAIAERLTQIQVFLKEKSAEIDEKFAEKKRKLATGDELTTGVLKVVKVYLAVKRR
IQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVLNPLGVPSRMNVGQILETHLGM
AAKGLGDKIEKMLKEQRTVLELREFLDKIYNKVGGEQEDLDSLTDDEILALSGNLRAGVP
LATPVFDGAEESQIKDLLELADISRTGQTVLFDGRTGEQFDRPVTVGYMYMLKLNHLVDD
KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR
TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atggcatactcatataccgaaaagaaacggatccgtaagaattttggtaaattgccccaa
gtaatggaagcaccgtacttactctcgattcaggtcgattcgtatagaacgttcttgcaa
ggtggcaaatctccaaaaaaccgcgaagatatcggtctccaagccgcatttcgttcagtt
tttcctatagaaagttattctggcaatgctgctttagaatttgttgagtatagccttggt
aagcctgagtttgatgtgcgtgaatgtattttacgtggttcgacttatgcggcaccaatg
cgcgtaaaaattcgtttgattattaaagatcgcgaaactaaatctattaaagacgtacgt
gaacaagaagtctacatgggtgaaatgccacttatgacagacaatggtacctttgtaatc
aatggtactgagcgtgtaattgtatctcagttacaccgttcgccaggcgtattctttgac
cacgataaaggtaagactcactcaagtggtaaagtgttgtactcagcacgtatcattcct
taccgtggttcatggttagatttcgagttcgacgcaaaagatcttgtttacgtacgtatt
gaccgtcgtcgtaaattacttgctactgttgtgttacgtgcactaggttataacaatgaa
caagtcttgaatttgttctatgaaaaagtacctgtgtatcttgacatgggcagttatcaa
attgaccttgttcctgagcgtttacgtggtgaaatggctcaatttgatattactgacaat
gaaggtaaagtcattgttgagcaaggtaaacgtatcaacgcgcgtcacgtacgtcaaatg
gaagcttcaggtttaactaaactttcagttcctgatgaatacttatatgagcgtattact
gctgaagatattactttacgtgatggtgaagtaattgctgcaaataccttgttaagccat
gaagttatggtgaagttagctgaaggtggtgttaaacaatttaacatcctattcacaaac
gacatcgatcgtggttctttcgttgctgatacattacgtgcagatacaacaacgggtcgt
gaagaagcattagtagaaatttataaagtaatgcgtccaggcgagccgccaacaaaagaa
gccgctgaaaacttattcaataacttattcttctcttctgagcgttatgacttatctcca
gtaggtcgtatgaagttcaaccgtcgtttaggtcgtccttacgaagttggtactgatcag
aaatcgcgtgaagttgaaggtattttatcgcacgaagatattatcgatgtattacgtaca
ttggttgaaatccgtaacggtaaaggcgaagtagacgacatcgaccacttaggtaaccgt
cgtgtacgttctgttggtgaaatgacagaaaaccaattccgtgttggtttagttcgtgtt
gagcgtgctgttaaagagcgtttaagccaagcagaaacagataacttgtctccacaagat
ttgatcaacgcaaaaccagttgctgctgcaatcaaagaattctttggttcaagccagttg
tctcagttcatggaccaaaacaacccattatctgagattacgcataaacgtcgtgtatct
gcacttggtcctggtggtttaacgcgtgagcgtgcaggcttcgaagtacgtgacgtacat
caaactcactatggtcgtgtttgtccaattgaaactcctgaaggtccaaacattggtttg
atcaactcgctttctgtatatgcaaaagcgaatgacttcggtttcttggaaacaccttac
cgtagagtagtagatggccgtgtaactgatgcagttgaatatttatctgctattgaagaa
gtaggtactgttattgcacaggccgattctgctgtagataaagatggcaacttaacagaa
gagtttgtttctgttcgtcatcaaggtgaattcgtacgtatgccacctgaaaaagtgacg
catatggacgtttctgcacagcaagttgtatctgttgctgcatcacttattccattcctt
gaacacgatgacgcgaaccgtgcattaatgggttcgaacatgcaacgtcaggctgttcct
actttacgtgctgacaaaccacttgtcggtacaggtatggaagcgaacgtagcacgtgac
tctggtgtgtgtgtaattgcaaaccgtggtggtgcaattgaatttgtagatgcgtctcgt
atcgttattcgtgtaaacgaagatgaaatgatcgctggtgaagctggtgtagatatctac
aacctcatcaaatatacacgttcaaaccaaaatacttgtattaaccaaaatgttatcgtg
aatttgggcgacaaagttgctcgtggtgacatcttggcagacggtccgtcaacagacatg
ggtgaacttgcgcttggtcaaaacatgcgtgtagcgttcatgacatggaatggttataac
tacgaagattcgatcttgttatctgagcgtgttcttcaagaagaccgtttaacttctatt
catattcaagaattgtcatgtgtagcacgtgatactaagttaggtgcagaagaaattact
gccgatattcctaacgtaggtgaagccgcgctttctaaacttgatgaatcaggtattgtt
tatatcggtgctgaagttactgctggtgacatccttgttggtaaagtaacgcctaaaggt
gaaactcagttaactcctgaagaaaaattgcttcgcgcaatctttggtgaaaaagctgcg
gacgttaaagattcatctttacgtgtgccatctggtactaaaggtacagttatcgacgtt
caagtcttcacgcgtgatggcttagagaaagatgaccgtgcattagcaattgaaaaagca
cagcttgactcttaccgtaaagacttgaaagaagaatacaaaatcttcgaagaagcggct
cgtgagcgtgtaattcgcttgcttaaaggccaagattctaacggtggtggttcaactaaa
cgtggtgataaactttctgaagatttattgtctggtttagagcttgttgatttacttgaa
attcaaccagcagatgaagcaatcgctgagcgtttaactcaaattcaagtgttcttaaaa
gaaaagagcgcagaaattgatgagaaattcgctgagaagaaacgtaagcttgcaacaggt
gatgagttaacaactggcgtattgaaagttgttaaggtttacttagctgttaaacgtcgt
attcagcctggtgataagatggctggtcgtcacggtaacaagggtgttgtatctaacatc
ttgcctgttgaagacatgccacacgatgctaacggtgtgccggtagatatcgtattgaac
ccgttgggtgtaccatctcgtatgaacgtgggtcagattcttgagactcacttaggtatg
gcagctaaagggctaggcgacaaaatcgaaaaaatgttgaaagaacaacgtacagtttta
gaactacgtgaattcttagacaagatttataacaaagtcggtggcgagcaagaagatctt
gatagcttgactgatgacgaaatcctagcactttcaggcaacttgcgtgcgggtgttcct
ttagctactccggtatttgatggtgctgaagaaagtcaaattaaagacttgcttgagttg
gctgatatttcacgtacaggtcaaacagtattgtttgacggacgtacaggtgaacagttt
gaccgtcctgtaactgttggttacatgtacatgcttaagttgaaccacttggttgatgac
aaaatgcatgcgcgttcaactggttcttactcgcttgttacacaacaaccgcttggtggt
aaagcacaattcggtggtcagcgtttcggtgagatggaagtatgggcacttgaagcatac
ggtgcagcatatacactccaagaaatgctcacagtgaagtcggatgacgttgaaggacgt
actcgcatctataagaatattgtagatggtaaccattatatggatccgggtatgcctgaa
tcgttcaacgtattgaccaaagagatccgttctttaggtatcaacattgaactgaaaaat
ggtgactaa
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