KEGG   Acinetobacter chenhuanii: ABLB96_05880
Entry
ABLB96_05880      CDS       T11543                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
achu  Acinetobacter chenhuanii
Pathway
achu02020  Two-component system
achu02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:achu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ABLB96_05880
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ABLB96_05880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:achu03021]
    ABLB96_05880
Transcription machinery [BR:achu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ABLB96_05880
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID CggR_N
Other DBs
NCBI-ProteinID: XDO76988
LinkDB
Position
1217247..1218695
AA seq 482 aa
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESLSESLS
TLEKQETDDLTTELNANHLPDDLPVDTEWDDIYTHQSTALATPEFEEREDNRQVQMTLKE
HILEQVNLLHFSKIDQLIAFCIVDALDDKGFLEAELEEILLAVQHLLNEMDIEEEVEEDE
ILVVLKYIQRLDPIGIGARNLAECLKVQLEFLPQETEYLKEAKSLLQYYELLIANDLNKL
LKQTGLSREQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVIP
KLRINSFYSGMIRRADQSDDNLYLRNQMLEAKNFIKSIDERHKTLLKVASCIVEHQKAFL
EIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRGLFELKYFFSSHVGTTAGGEA
SSTAIRAMIKKLVSNENPRKPLSDNTIAALLKDEGIEVARRTVAKYRESLHIPSSSERKV
LI
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgaaattatctgttggattgaaagttgcgaattcattatcgttaacgcctcaattgcag
caggcaatccgtttattacaactctcgagtttagagttagagcaagaaattcaaattcaa
ttagatagtaatccattacttgaaaaagtagaagatgaatcattatcagaaagtttatct
accttagaaaaacaagaaacagatgatcttacaaccgaattgaatgccaaccatttacct
gatgatttgcctgttgataccgaatgggacgatatttatacccatcaatctacagcttta
gctacacctgaatttgaagagcgtgaagataaccgccaggttcagatgacgctcaaagag
catattttagaacaagtgaacttactacatttttcaaaaatagatcagttgattgctttt
tgtattgttgatgcattagatgataaaggttttttagaagctgagttagaagagattctc
ttagctgtacagcacttactaaatgaaatggatattgaagaagaggttgaagaggacgaa
attttagtcgtcttgaagtatattcaacgccttgatccaattggtatcggtgctcgtaat
cttgctgaatgtttaaaagttcagttagagtttttacctcaggaaactgagtatttaaaa
gaagctaaaagtttgcttcagtattatgagttactaattgcaaatgatctcaataaatta
ttaaagcaaaccggtctttctagggaacagttaaagtttgcggttgatttattaaaaaca
ttgaagccttatcctgggatggattttgaaaagcaagaatcggaatatcagattccagat
gtagtggtagctaaaaaggatttgcattggcaagtccagttaaacccagatgttatacca
aaattaagaatcaattctttttattcaggcatgattcgcagggcagatcagagtgatgat
aatttatatctgcgtaatcaaatgcttgaagctaagaattttataaagagtattgatgaa
aggcataaaactttattgaaagttgctagttgtattgttgagcatcaaaaagcatttctt
gaaataggtccagaggctatgaaaccgctggtactacgggatgttgccgaagaagtagaa
ttgcatgaatctacggtttctcgagtgactacaaataagtacatgctgaccccacgagga
ctttttgaattgaaatacttcttttctagtcatgtaggcacgacagcgggaggagaagct
tcttctactgcaattcgagcaatgattaaaaaattagtttctaatgaaaatccacgtaag
ccgttgtctgataatacaattgcggcgttattaaaagatgaaggaatagaagtggcgaga
aggactgtagcaaaatatcgagaatcgttacatattccatcgtcatccgaaagaaaagtc
ttgatctga

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