Acinetobacter chenhuanii: ABLB96_05880
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Entry
ABLB96_05880 CDS
T11543
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
achu Acinetobacter chenhuanii
Pathway
achu02020
Two-component system
achu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
achu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABLB96_05880
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABLB96_05880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
achu03021
]
ABLB96_05880
Transcription machinery [BR:
achu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABLB96_05880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
CggR_N
Motif
Other DBs
NCBI-ProteinID:
XDO76988
LinkDB
All DBs
Position
1217247..1218695
Genome browser
AA seq
482 aa
AA seq
DB search
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESLSESLS
TLEKQETDDLTTELNANHLPDDLPVDTEWDDIYTHQSTALATPEFEEREDNRQVQMTLKE
HILEQVNLLHFSKIDQLIAFCIVDALDDKGFLEAELEEILLAVQHLLNEMDIEEEVEEDE
ILVVLKYIQRLDPIGIGARNLAECLKVQLEFLPQETEYLKEAKSLLQYYELLIANDLNKL
LKQTGLSREQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVIP
KLRINSFYSGMIRRADQSDDNLYLRNQMLEAKNFIKSIDERHKTLLKVASCIVEHQKAFL
EIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRGLFELKYFFSSHVGTTAGGEA
SSTAIRAMIKKLVSNENPRKPLSDNTIAALLKDEGIEVARRTVAKYRESLHIPSSSERKV
LI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatctgttggattgaaagttgcgaattcattatcgttaacgcctcaattgcag
caggcaatccgtttattacaactctcgagtttagagttagagcaagaaattcaaattcaa
ttagatagtaatccattacttgaaaaagtagaagatgaatcattatcagaaagtttatct
accttagaaaaacaagaaacagatgatcttacaaccgaattgaatgccaaccatttacct
gatgatttgcctgttgataccgaatgggacgatatttatacccatcaatctacagcttta
gctacacctgaatttgaagagcgtgaagataaccgccaggttcagatgacgctcaaagag
catattttagaacaagtgaacttactacatttttcaaaaatagatcagttgattgctttt
tgtattgttgatgcattagatgataaaggttttttagaagctgagttagaagagattctc
ttagctgtacagcacttactaaatgaaatggatattgaagaagaggttgaagaggacgaa
attttagtcgtcttgaagtatattcaacgccttgatccaattggtatcggtgctcgtaat
cttgctgaatgtttaaaagttcagttagagtttttacctcaggaaactgagtatttaaaa
gaagctaaaagtttgcttcagtattatgagttactaattgcaaatgatctcaataaatta
ttaaagcaaaccggtctttctagggaacagttaaagtttgcggttgatttattaaaaaca
ttgaagccttatcctgggatggattttgaaaagcaagaatcggaatatcagattccagat
gtagtggtagctaaaaaggatttgcattggcaagtccagttaaacccagatgttatacca
aaattaagaatcaattctttttattcaggcatgattcgcagggcagatcagagtgatgat
aatttatatctgcgtaatcaaatgcttgaagctaagaattttataaagagtattgatgaa
aggcataaaactttattgaaagttgctagttgtattgttgagcatcaaaaagcatttctt
gaaataggtccagaggctatgaaaccgctggtactacgggatgttgccgaagaagtagaa
ttgcatgaatctacggtttctcgagtgactacaaataagtacatgctgaccccacgagga
ctttttgaattgaaatacttcttttctagtcatgtaggcacgacagcgggaggagaagct
tcttctactgcaattcgagcaatgattaaaaaattagtttctaatgaaaatccacgtaag
ccgttgtctgataatacaattgcggcgttattaaaagatgaaggaatagaagtggcgaga
aggactgtagcaaaatatcgagaatcgttacatattccatcgtcatccgaaagaaaagtc
ttgatctga
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