Acinetobacter chenhuanii: ABLB96_17825
Help
Entry
ABLB96_17825 CDS
T11543
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
achu Acinetobacter chenhuanii
Brite
KEGG Orthology (KO) [BR:
achu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
achu03016
]
ABLB96_17825
Enzymes [BR:
achu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ABLB96_17825
Transfer RNA biogenesis [BR:
achu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ABLB96_17825
Prokaryotic type
tRNA splicing ligases
ABLB96_17825
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
XDO75815
LinkDB
All DBs
Position
3712184..3713389
Genome browser
AA seq
401 aa
AA seq
DB search
MGIQKILNEEAHYGVPVKIFTQDIDSESIEQLKKMAQLQFIYSHIAVMPDVHVGKGATVG
SVIPTKHAIIPAAVGVDIGCGMNAIRLSLKASQLPDNLSRLRDAIERKVPVGFDLHKQIK
AKASTIIPLEKRLQPIIKKHPGLVRMLRQFDATWQKQLGTLGGGNHFIELCIDENQDIWI
MLHSGSRGLGNVIGTYFIELAKKEAQHRFGHVPDKDLSYFAEGSNSFNDYVEAVEWAQEY
AFENRKEMMRLILEAIRPLLPSFQMTKEAINCHHNYVSRETHFGENLFVTRKGAIRAGLD
ELGIIPGSMGARSYIVKGKANPESFCSCSHGAGRKMSRSKAKVLFNQQDLIEQTQGIECR
KDIGVVDEIPSAYKDIDEVMANQSDLIEVIHTLKQVLCIKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacaaaaaatattaaacgaagaggcacactatggtgtccccgttaaaattttc
actcaagatatagatagtgaaagtattgaacaactcaagaaaatggctcaactgcaattt
atctattcacatattgctgttatgccagatgttcacgtaggaaaaggcgcaactgtagga
agtgttatcccaactaaacatgccattattcctgctgcagtcggtgtagatattggctgt
ggaatgaatgcaattcgtttgagtctaaaggcttcgcaattacctgataacttaagtcgt
ttgcgagatgccattgaacgtaaagtacctgttggctttgatttacataaacagattaaa
gctaaagcgtcgactattattcccctcgaaaagcgtttgcaaccgatcatcaagaagcat
cctggcctagttcgcatgcttcgccaatttgatgcgacttggcagaaacagttaggcaca
ttaggaggtggtaatcattttatagagttatgcattgatgaaaatcaagatatatggatt
atgctccattctggtagccgaggtcttggtaatgtcattggtacttattttatagagctc
gccaagaaagaagcacagcatcgctttggacatgtaccagataaagacttaagttatttt
gctgaaggctcaaatagttttaatgattatgtcgaagcggtggaatgggcacaagaatat
gcttttgaaaatcgcaaggaaatgatgcgattaatcttagaagcaattcgtcctcttctc
ccctcgtttcaaatgacaaaagaagcgatcaattgccatcataactatgtgagtcgagaa
acgcattttggtgaaaaccttttcgttacccgaaaaggagcaattagagcaggtttagat
gagttaggaattattcctggctctatgggagcacgctcttatattgtaaaaggcaaagca
aatcctgagtctttctgttcttgttctcatggcgctggacgaaaaatgagtcgcagcaaa
gcaaaggttctttttaatcaacaagatttaattgagcaaactcaaggtattgaatgtcgt
aaagacatcggtgtggtcgatgaaatcccaagtgcttataaagatattgatgaggtgatg
gcgaatcaatctgatctcattgaagttattcatacacttaaacaagttttatgtattaaa
ggttaa
DBGET
integrated database retrieval system
