Acinetobacter baylyi: ACIAD0308
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Entry
ACIAD0308 CDS
T00185
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' chain (Transcriptase beta' chain) (RNA polymerase beta' subunit)
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aci
Acinetobacter baylyi
Pathway
aci03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aci00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACIAD0308 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aci03021
]
ACIAD0308 (rpoC)
03400 DNA repair and recombination proteins [BR:
aci03400
]
ACIAD0308 (rpoC)
Enzymes [BR:
aci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACIAD0308 (rpoC)
Transcription machinery [BR:
aci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACIAD0308 (rpoC)
DNA repair and recombination proteins [BR:
aci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACIAD0308 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
CAG67268
UniProt:
Q6FF89
LinkDB
All DBs
Position
306586..310827
Genome browser
AA seq
1413 aa
AA seq
DB search
MTQPSERMLLGIRRNKLKDLLDIMRKKTDSDGHTPIEFDRIRIGLASPEMIKSWSHGEVK
KPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRR
ERMGHIELASPVAHIWFLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPLEKYQL
LTDEEYFNALEEHGDEFSAKMGAEAVQDLLKDIDLEAEISRLREEIPQTTSETKLKKASK
RLKLMEAFKESNNKPEWMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRL
KRLLDLAAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFR
QNLLGKRVDYSGRSVITVGPTLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKK
MVERETPEVWDVLANVIRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNA
DFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVN
AKGEGMMFADTHEVNRALATGQVAIHARVKVRVHQTVINEDGQREKQTIVVDTTPGRCLL
WEVVPEGLSFEMINLEMTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSV
GMEDMVIPPQKQAIIDKAETEVREIEEQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMD
NLSFTNVKNKQGQDEKQKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPI
KANFREGLTVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTMGG
LVMTPFIQGGDVIEPLRDRVLGRVTAEDVRRASDNEIVLPRGTLIDEKIAAQLEEAGVDE
VKVRSVIACESTFGVCAKCYGRDLARGHQVNPGESVGVMAAQSIGEPGTQLTMRTFHVGG
AASRTSAANSVQVRNKGTVRFHNVKTVQHAKGHLVSVSRSGEIGIADELGRERERYKLPY
GASILIKDGEAVEAGGIVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTV
EILPVTARPASGKDLRPAIVLDTTDGGEQFYFLPQNTIVTVRDGETIGVGDVLGRVPQET
SRTRDITGGLPRVADLFEARKPKEHAILAEVSGIVSFGKETKGKNRLVITPDDGSEIYEE
LIPKWRTINVFEGEHVNRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKI
NDKHIEVIVRQMLRKVDITDGGDTSFIKGEQVDYIRVVQENQAVLAQNKFPAKFERQLMG
ITKASLSTDSFISAASFQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLE
RRRQEAEAAEFELHNDFSEVDQAFSQALNQEQF
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
gtgacccagccgagtgagcgaatgctcctcggtatacggagaaataaattgaaagacttg
ctcgatatcatgcgtaagaaaacggactcagacggtcacacaccgattgagtttgaccgt
attcgtattggtcttgcgtcaccagaaatgattaagtcatggtctcacggtgaagttaaa
aagcctgaaaccattaactaccgtacttttaaaccagaacgtgatggtttgttctgtgcc
aaaatctttggtccagtaaaagattacgaatgcttgtgtggtaaatacaagcgtatgaaa
tacaaaggcgtcatttgtgaaaaatgtggcgttgaagtaacaactgcaaaagttcgtcgt
gaacgtatgggtcacatcgagcttgcatctccagtggctcacatctggttcttaaaatca
ttgccaagccgtatcggtttgctacttgatatgacactacgtgatatcgaacgtgtattg
tatttcgaatcttacgtagtaactgatcctggtatgactccgcttgagaaatatcagctt
ttaaccgacgaagaatatttcaacgcgcttgaagagcatggcgatgaattctctgccaaa
atgggtgcagaagcagttcaagacttgttgaaagatatcgatcttgaagctgaaatttca
cgtctacgtgaagaaattccacaaacaacctctgaaacgaagttgaaaaaagcgtcaaaa
cgtttgaaattgatggaagctttcaaagagtcgaacaacaagccagaatggatggtgatg
aatgtattgccagtacttccgccagatctacgtccgcttgtaccacttgaaggtggccgt
tttgcgacatctgatctaaacgatctttaccgtcgtgtgatcaaccgtaacaaccgtttg
aagcgtcttcttgatcttgcggcgccagatatcatcgtacgtaacgaaaaacgtatgttg
caagaatctgtagatgcattgcttgacaacggccgtcgtggtcgtgcgattactggttcg
aataaacgtccattgaaatctttggcagatatgatcaaaggtaaacaaggtcgtttccgt
cagaacttgttgggtaaacgtgttgactattctggtcgttcggtcattaccgtaggtcct
actttacgtctacatcaatgtggtcttccaaagaaaatggcacttgagctcttcaagccg
tttatttttgcaaaactacaggcatctggtcaggcaaccaccattaaagctgcgaagaaa
atggttgaacgcgaaaccccagaagtatgggacgttcttgccaacgtgattcgtcagcat
ccagtgatgttgaaccgtgcgccaacacttcaccgtttaggtcttcaagcgtttgaaccg
attctgattgaaggtaaagcgatccgtctacacccactcgtctgtgctgcgtttaacgcc
gacttcgacggtgaccaaatggcggtacacgtgccattgacacttgaagcacagcttgaa
gcccgtgccttgatgatgtcgaccaacaacatcttgtcaccggccaacggtgagccgatt
atcgttccttctcaggacgtggtcttgggtctttactacatcacccgtgatgcagtcaat
gccaaaggcgaaggcatgatgtttgctgacacacacgaagttaaccgcgcgcttgcaacc
ggtcaggtggctattcacgcacgcgtaaaagttcgtgttcaccaaaccgtaatcaatgaa
gacggtcaacgtgaaaagcaaactattgttgtggatactacaccaggtcgctgcttactt
tgggaagttgttcctgaaggcttgagctttgaaatgatcaaccttgagatgactaaaaag
aacatctcgaagttaatcaactcgtgctaccgtaagctcggtcttaaagacacggttatt
ttcgccgatcagttgatgtatcttggcttccgtcaagcaacacgttcaggcgtttctgtt
ggtatggaagacatggtcattccaccgcagaagcaagcgattatcgacaaagcagaaact
gaagttcgtgaaatcgaagagcagttcgagcaaggtttcgtaaccgcaggtgagcgttat
aacaaagtggtcgatatctgggcgcgtaccaacgaccaagttgcaaaagcgatgatggac
aacttgtctttcaccaatgtgaaaaacaagcaaggtcaagacgagaaacaaaaatcgttt
aacagcatctatatgatgtctgactcgggtgcccgtggtagtgcggcgcagattcgtcag
ttggcgggtatgcgtggtttgatggcgaaaccagatggttcgatcattgaaacgccaatt
aaggcaaacttccgtgaaggtttgacggtacttcagtactttatttcaacgcacggtgcg
cgtaaaggtttggccgataccgcattgaaaactgcaaactcgggttacttgacacgtcgt
cttgttgacgttgcgcaggacttggtgattaccgagccagattgtggcaccatgggtggt
ctggtgatgacaccattcattcaaggtggtgacgtgatcgagccattacgtgaccgcgta
ttgggtcgtgtaacggcagaagacgtacgtcgtgcatctgacaatgaaatcgtattgcct
cgcggtacgctcattgatgaaaaaatcgcagctcagcttgaagaagcgggtgtcgatgaa
gttaaagtccgttcagtcattgcatgtgaatctacattcggtgtgtgtgcaaaatgttat
ggacgcgaccttgcacgtggtcatcaggtcaaccctggtgagtctgttggtgttatggct
gcccaatcaattggtgagccaggtacacagttaaccatgcgtaccttccacgtgggtggt
gcggcaagccgaacttctgctgcaaacagtgttcaagtacgtaataaaggtacggttcgt
ttccataacgtaaaaactgtacagcatgcaaaaggtcacttggtctctgtttcacgttct
ggtgaaatcggtattgcagatgagttaggtcgtgagcgtgaacgctataaacttccttac
ggtgcaagcatcttgattaaagatggtgaagctgtagaagctggtggtattgtggcgact
tgggatccgcatacgcatccactcgtaacagaagtagcaggtaaggcacgtttcagccaa
atcgcggatggcgtgactgcaacatcgaaaactgatgatgcaacaggtatgactactgtt
gaaatcttgcctgtaacagcacgtcctgcgtctggtaaagatttacgtcctgcgattgta
ctggatacaacggatggtggtgaacagttctacttcttgccacaaaataccattgtgacc
gttcgtgacggtgaaacgattggtgtaggtgatgtacttggtcgtgtaccacaagaaact
tcacgtacacgtgatattaccggtggtcttccacgcgtagctgacttgttcgaagcgcgt
aaaccgaaagaacacgcgatcttggcagaagtgtctggtatcgtgagctttggtaaagaa
accaaaggtaagaaccgtttagtgatcacgcctgatgatggttctgaaatttacgaagaa
ttgattccaaaatggcgtaccattaacgtgttcgaaggtgagcatgtcaaccgtggtgaa
accatttctgatggtccgcaaaacccacatgacatcttgcgtttgaaaggcgaagtcgca
ttgaccaattacatcgtgaacgaagttcaagacgtttatcgtctccaaggtgtaaaaatc
aacgacaaacatattgaagtcatcgtacgtcaaatgttgcgtaaagtggacatcaccgat
ggcggcgataccagcttcatcaaaggcgaacaagtggattacatccgtgttgttcaagag
aaccaagcagtcttggcgcaaaacaaattccctgcgaaatttgagcgtcaattgatgggt
attaccaaagcatcgctttcgactgactcatttatctcggctgcatcgttccaggaaaca
acgcgcgtgttaaccgaagcggctgttactggtaaagaagatgatctacgcggtctcaaa
gagaacgtggtggtgggtcgtctgatcccagcaggtacaggtctcgcttatcatctagag
cgtcgtcgtcaggaagcggaagcggcagagtttgaactgcacaacgacttcagcgaagtc
gatcaagcgtttagtcaagcattgaaccaagaacagttctaa
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