Acinetobacter baylyi: ACIAD0402
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Entry
ACIAD0402 CDS
T00185
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aci
Acinetobacter baylyi
Pathway
aci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACIAD0402 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aci03019
]
ACIAD0402 (pnp)
03016 Transfer RNA biogenesis [BR:
aci03016
]
ACIAD0402 (pnp)
Enzymes [BR:
aci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACIAD0402 (pnp)
Messenger RNA biogenesis [BR:
aci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACIAD0402 (pnp)
Transfer RNA biogenesis [BR:
aci03016
]
Prokaryotic type
tRNA degradation factors
ACIAD0402 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_N4BP1_2nd
S1_2
Motif
Other DBs
NCBI-ProteinID:
CAG67346
UniProt:
Q6FF12
LinkDB
All DBs
Position
402324..404417
Genome browser
AA seq
697 aa
AA seq
DB search
MSMFNIIRKEFQFGQHQVVLETGRVARQANTVLVTMGGVTVLVAVVAQPKAKAGQDFFPL
TVNYQEKQYAAGRIPGGYGKREGRASEAETLISRLIDRPIRPLFPEGYFNEIQITATVVS
SDKTMDADIAAMLGASAALSIAGTPFRGPIGGARVGLINGEYVLNPNFEQLAQSDLDLVV
AGTESAVLMVESEAKELSEDQMLGAVLFGHDEMQIAVQAIKEFAAAAGAVESTWVAPTKN
ETLLEQLKAAFEAKISEAYTIAVKQDRYTALDALYAEAVAQFVPENDETGIADEVNELFE
DLKYRTVRDNILSGKPRIDGRDTKTVRAIDVQVGVLDRAHGSALFTRGETQALVTTTLGN
TRDALMVDTLAGTKTDNFMLHYNFPAYSVGETGRESGPKRREIGHGRLARRGVQAVLPAA
DRFPYVIRIVSDITESNGSSSMASVCGASLSLMDAGVPLKAPVAGIAMGLVKEGERFAVL
SDILGDEDHLGDMDFKVAGSANGITALQMDIKIEGITEEIMEVALNQAYAGRMHILNEMN
KVISRARAEISAHAPTFEVITINPDKIRDVIGKGGATIRQITEETKAAIDIEDNGTVRVF
GETKAAARAAIAKIQALTAEVEPGKIYDGKVIRIVEFGAFVNIMPGTDGLLHISQISNER
VANVSDVLKEGQDVKVQVADVDNRGRIKLSMKDIEQA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtttaatattattcgtaaagaatttcagtttggtcaacatcaggtggtacta
gaaacgggtcgcgttgcacgtcaagcaaacaccgttttagtcacgatgggtggtgtgacg
gtattggttgcagtcgttgcacaacctaaagcgaaagcgggtcaagactttttcccactg
actgtgaactatcaagaaaaacaatatgctgctggtcgtatcccaggtggttatggcaag
cgtgaaggccgtgcgtctgaagctgaaactttaatttcacgtttgattgaccgtccaatt
cgtccgttgttcccagaaggttacttcaacgaaattcaaatcaccgcgacagtggtttct
tctgacaaaacgatggatgccgatattgcagccatgctaggtgcttcagcggcattgtca
attgcgggtacgccattccgtggtccaatcggtggtgcacgtgttggtttgatcaatggc
gaatacgttttaaacccaaattttgagcaacttgctcagtctgaccttgaccttgtcgtt
gcgggtacagagtctgctgtactcatggttgaatctgaagcaaaagaactttcagaagat
caaatgctaggcgctgtactttttggtcatgacgaaatgcaaattgcagttcaagcgatc
aaagagtttgctgcggcggctggtgcagttgaatcaacttgggttgcgccaacgaaaaac
gaaacattgcttgagcaattaaaggcagcgtttgaagctaaaatttctgaagcatatacc
attgcggtgaaacaagatcgttatacagcacttgatgcactttatgcagaagctgtagct
cagttcgttccagaaaatgacgaaacgggtattgccgatgaagtcaacgaattattcgaa
gaccttaaataccgtaccgtacgtgacaacatcttgtcaggtaagccacgtattgatggt
cgtgatactaaaactgttcgtgctatcgacgttcaagtgggcgtattagatcgtgcacat
ggttctgcattatttacacgtggtgaaactcaggcgttggtgaccaccactttgggtaat
acgcgtgatgcgttaatggttgatacccttgcgggtactaaaactgacaacttcatgttg
cactacaacttcccagcatactcagtgggtgaaactggtcgtgaatctggtccaaagcgc
cgtgaaattggtcatggtcgtttggcacgtcgtggtgttcaagccgttttacctgcagct
gaccgcttcccgtacgtgattcgtatcgtatcagacattactgaatcaaatggttcatcg
tcaatggcgtctgtatgtggtgcatcactttcattgatggatgcaggtgttccattgaaa
gcaccagttgcgggtatcgcaatgggcctagtcaaagaaggtgagcgttttgctgtactt
tctgacatcttgggtgacgaagatcatttaggtgatatggactttaaggttgctggttct
gccaatggtattactgcacttcaaatggacatcaaaattgaaggcatcactgaagaaatc
atggaagttgcattgaatcaggcgtatgcaggtcgtatgcacatcctgaatgaaatgaac
aaagtgatttcacgtgcgcgtgctgaaatttcagcacatgcaccaacgtttgaagtcatt
acgatcaatccagacaagattcgtgacgtgattggtaagggcggcgcgacgattcgtcag
atcactgaagaaaccaaagccgcaattgatattgaagacaatggtacagtgcgtgtattt
ggtgaaaccaaagcggctgcacgtgccgcaattgcaaaaattcaggccttaacggctgaa
gttgaacctggcaaaatctatgatggtaaagtcatccgtatcgtagaatttggtgcgttc
gtgaatatcatgccaggtactgatggtttgctacatatttcacagatttcaaatgaacgt
gtagccaatgtctctgatgttcttaaagaaggtcaggatgttaaagtacaagttgcagat
gtcgacaaccgtggtcgtatcaaattgagtatgaaagatattgaacaagcttaa
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