Acinetobacter baylyi: ACIAD1314
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Entry
ACIAD1314 CDS
T00185
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase (DEAD box)
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
aci
Acinetobacter baylyi
Pathway
aci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACIAD1314 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aci03019
]
ACIAD1314 (rhlB)
Enzymes [BR:
aci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACIAD1314 (rhlB)
Messenger RNA biogenesis [BR:
aci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACIAD1314 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
ERCC3_RAD25_C
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAG68184
UniProt:
Q6FCM5
LinkDB
All DBs
Position
1313277..1314428
Genome browser
AA seq
383 aa
AA seq
DB search
MASGFGTLNLHPQLKQAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLIS
VINDLLNNPIQEQRYRGEVRALILAPTRELALQIESDARELTRFTDLNVLTLVGGVDFDK
QKKPLNEKFIDILVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRF
SPRKEQRQTLMFSATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYMVAKQDKYR
LLQDILRDEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQG
KNNIMIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGTQGVSISFLSEDDA
FYLPEIEKAIGKKLPLTRLEGYC
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggttttggaaccttgaatttacatccgcaacttaaacaagcgattgatgca
ttagggtttacacaaatgaccccaattcagcaaaaggttttaaaatatacactcgcagga
catgacgcgattgggcgagcacaaaccggaacaggtaaaacagcagccttcctcattagc
gtaatcaatgatttactcaataatcctattcaagaacaacgctatcgtggtgaagtgcgt
gcgctgattttagcacctacaagagagttggctctacaaattgagagtgatgcacgagag
ttaactcgatttacagatcttaatgtgttaacacttgtgggtggagtagattttgataaa
cagaaaaaaccgctgaatgaaaagtttatcgacattttggttgcaacacctggacgtctg
attgattttgttgagcagaaagaagtctggttagatcaaattgagtttctggtcattgac
gaagcagaccgtttgctcgatatgggatttattccctcagtaaaacgaattgttcggttt
tcaccgcgcaaagaacaacgtcagacgctcatgttttctgctacatttagttatgatgtg
cttaacttggcaagacaatggttgtttgagccagtaacggttgaaatcgaaccagagcaa
aaaaccaacaatgacgttgagcagcgtgtgtacatggttgcaaaacaagacaaatatcgt
cttttacaagacattcttagagatgaaccgattgataaggtgatgatttttgcgaatcgt
cgcgatcaggttcgtcgtctttatgatcatttgaaaaaagatggttataaagtaggaatg
ttatctggtgaaattgcacaagataaacgacttaaaatgcttgagcagtttaagcagggt
aaaaacaacatcatgatcgcgaccgatgttgctggtcgtggcattcatgtagacggcgtt
tcgcatgttgtgaattttactttgccagaacagtcagatgattatgtgcatcggattggt
cgtactgggcgtgcaggtacacaaggcgttagtattagctttttgtctgaagatgatgcg
ttttacttgcctgaaattgaaaaagcgattgggaaaaaacttcctttaacgcgtttggaa
ggttactgttaa
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