Acinetobacter baylyi: ACIAD2089
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Entry
ACIAD2089 CDS
T00185
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aci
Acinetobacter baylyi
Pathway
aci03030
DNA replication
aci03430
Mismatch repair
aci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACIAD2089 (dnaE)
03430 Mismatch repair
ACIAD2089 (dnaE)
03440 Homologous recombination
ACIAD2089 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aci03032
]
ACIAD2089 (dnaE)
03400 DNA repair and recombination proteins [BR:
aci03400
]
ACIAD2089 (dnaE)
Enzymes [BR:
aci01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACIAD2089 (dnaE)
DNA replication proteins [BR:
aci03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACIAD2089 (dnaE)
DNA repair and recombination proteins [BR:
aci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACIAD2089 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAG68898
UniProt:
Q6FAL5
LinkDB
All DBs
Position
2072315..2075878
Genome browser
AA seq
1187 aa
AA seq
DB search
MQFVHLGIHTEFSITESIVRIPDLIKAAVQDDMPALALTDLSNLHAAVKFYTSCLKKGIK
PILGSVVRLNDPEHRITLLAMTNDGWKGLTEIVSRGHIEGQQLSIPCVQKEWILEQHQDI
IVLLGQHSDVGKMLCSSNPQKAEPLLQAWQEKFGNRVYIALTRTQRAGEEDYMVEAVKLA
AKYNIGVVAHNDVHFIERDDFDAHEARVCIADGYVLADHRRPRIYSSEQYFKTASEMEEL
FSDIPSAIENTYYIAQRCNVSLQLGTYFLPDYPIPDGFTIDTYFEHLSKEGLEERLNHLY
PIETRDQDWPEIRKPYDERIEYEVGIILKMGFPGYFLIVMDFIQWAKSNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVSRTYGRE
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMVPTKPLGVDLKQAIEMEPQLKDI
VTNPSNPDNDDAAEIWEMALKLEGITRNTGKHAGGVVIAPGKITDYSAVLCDADGTNRVA
QYDKDDVEAAGLVKFDFLGLRNLTVIEDAVQNINKRIQSEIPLDIANVPLDDKDAYLVFA
DANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL
HPLLESVLEPTYGIMVYQEQVMQAAQFCAGYTLGGADLLRRAMGKKKPEEMVKQRQIFIK
GAAEKEIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYHTAWLKAHYPAEFMAAVLSS
EMQNTDSIVFLIDDCRNNALEVLPPSVNMSLYHFHASDERTIVYGLGAIKGVGEQAMQSV
IDSRIKNGPYTDLFDFCHRIDLKKINKRTLEALIRAGALDCLQIERSSLMAQLPEAVQAA
EQARQNRETGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRPE
LKSFIPAKLNEVTPTRRGVTTVFAGLVLDVANFPNRMVITLDDGTARIEVSCNHERFQRF
KDIVVVEQVVVIEGEIYEREGFDRPMARLSKAFSLNEIRQKRANHIRIQPAEEQISKTLA
HDLQNIILPFCNVDMCQHIPVMLTLEQPYATAEVHLGQNWKVAPLDELLIKLRDYFGKDA
IYIEYQVKSKAAKAAEPVRSAPLSPPPQDISMDEAMDLYQAEVSQYS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgttcatcttggtattcatacagagttttcgattacagaatcgattgtgcgt
atacctgatcttattaaagctgctgttcaagatgatatgccagctttggcattgacagat
ctatccaatttacatgcggccgtgaagttttacacttcttgtctcaaaaaagggattaaa
ccaattttggggagtgtggtcagattaaatgatcctgagcatcgtatcactttgcttgcc
atgaccaatgatggttggaaaggcctgactgaaattgtgtcacgtgggcatattgaagga
caacaactgagcattccttgtgtgcaaaaagaatggattctggagcaacatcaagacatt
attgtattacttggccagcatagtgatgttggcaaaatgctctgctcttctaacccccaa
aaagcagaaccattgcttcaagcgtggcaagagaaatttggaaatcgggtttatattgct
ctcacacgcacacaacgcgcgggtgaagaagattacatggttgaagctgtcaaactcgca
gcaaaatataatattggtgtcgtcgcgcacaacgatgtacattttatagaacgtgatgat
tttgatgctcacgaagcccgcgtgtgtatcgcagatggttatgtacttgcagatcaccgt
cgcccacgcatttatagctctgaacaatacttcaaaaccgcatctgaaatggaagaattg
ttttctgacattccgagcgccatagaaaatacctattatattgcacagcgttgtaacgtt
agtctgcaattagggacttactttttaccagattatccaattccagatggtttcaccatc
gatacctattttgaacatttatctaaagaaggtttagaagaacgtctcaatcatttatat
ccaattgaaacacgtgatcaagactggcctgaaatccgtaaaccctatgacgaacgtatc
gagtatgaagtcggaattattcttaaaatgggatttcctggctatttcttaatcgtcatg
gactttattcaatgggccaaaagtaatggtgtccctgttggtcctggacgtggttcgggt
gcaggctcattggttgcctatagccttaagattacagaccttgatccactccgttacgat
ctactttttgaacgtttcctgaatcctgaacgtgtttcgatgcccgattttgatgtcgat
ttctgtattgcaggtcgtgaccgagtcattgactatgtgtcgcgcacatatggtcgcgaa
gcagtatcacaaatcgcgacttttggtaccatggcagcaaaaggtgccattcgagatgta
gcacgggtattgggtaaatcttacggccttgccgatcgtatctccaaaatggtgccaacc
aaacctctgggtgtcgatttaaagcaagcgattgaaatggagccacagctcaaggatatc
gtaaccaatccatccaatccagataatgatgatgcggccgaaatctgggaaatggcgctc
aaacttgaaggaattactcgtaatacgggtaaacatgcgggcggtgtcgtcattgcgcca
ggtaaaattaccgattattcggcagtactgtgtgatgcagatggtaccaaccgcgtagct
caatatgataaagatgacgtagaagctgctggtctggttaagtttgactttttgggtctg
cgaaacttaaccgtgattgaagatgctgttcaaaatattaataaaagaattcagtctgaa
ataccattagatattgccaatgttccacttgacgacaaagatgcctatttagtctttgca
gatgccaacactaccgcggtattccagtttgaatccgtgggtatgaaaaagatgcttaaa
gaagcacgcccaagtaaattcgaagaaattattgcctttgtatctttataccgccctggc
ccaatggatctgattccagactttattcatcgtatgcatgggggtgagtttgaatatctg
catccattgctcgaaagtgtgctcgaaccaacctacgggattatggtttatcaggaacag
gtgatgcaggcagcgcagttctgtgcgggatatacgctcggtggtgcagacttacttcgc
cgtgcaatgggtaaaaagaaacctgaagaaatggtcaagcagcgccaaatcttcatcaag
ggtgcagcagaaaaagagatcgacgaagcaacagccaatcatatcttcgactatatggaa
aaatttgcaggctatggctttaacaaatcgcatgctgctgcttatgcacttgttgcctat
catactgcatggctcaaagcacactatcctgccgaatttatggccgccgtattatcgtca
gaaatgcaaaatacggacagtattgtctttttaattgatgactgccgtaataatgcactt
gaggttttgccaccttctgtcaatatgtcgttgtaccacttccatgccagtgacgagcgt
acaattgtttacggcttaggtgcaattaaaggtgtgggagaacaagccatgcaatctgtg
atcgattcacggatcaaaaatggcccttacacagacttatttgatttttgtcatcgtatc
gatcttaaaaaaatcaacaaacgaacccttgaagcgcttattcgcgctggagcacttgat
tgtttacaaatcgaacgctctagcttaatggcacagttacccgaagcggtacaagcggcc
gaacaagcgcggcaaaatcgtgaaacaggaattatggatctgtttggtgaagttgaagaa
gttcaacgtaaacctgccaagcctgtcaaaccctggtcagatgaagtccgactcaaaggc
gaaaaagacacattaggactttaccttacaggtcatccaattgatgtttatcgtcctgaa
ctgaaatcatttattccagcaaaactcaatgaagtgaccccaacacgccgtggtgtcacg
actgtgtttgctggcttagttttagatgttgccaactttccaaatcgtatggtaataacg
ctggatgatggtactgcgcgaattgaagtaagctgtaatcacgaacgttttcagcgattc
aaagacatcgtggtggtagaacaggtcgtcgttattgagggtgaaatctacgaacgcgaa
ggctttgatcgtccaatggctcgtttaagtaaagcttttagcttaaatgaaattcgtcaa
aagcgtgcaaaccatattcgtattcaacctgccgaagaacaaatatctaaaacattggct
catgatttacaaaatattattttgcccttttgtaatgtcgatatgtgccaacatattcca
gtcatgctgacactcgaacagccctatgcaacggcagaagttcatcttggacaaaactgg
aaagtcgcgccattagacgaattattaatcaagctgcgtgattactttggtaaagatgca
atctatatcgaatatcaagtcaaatccaaagcagccaaagcggctgaacccgttcgtagc
gcaccgttaagcccacctccgcaagatatctcgatggatgaagctatggatttatatcag
gccgaagtctcacaatactcttaa
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