Acinetobacter baylyi: ACIAD3500
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Entry
ACIAD3500 CDS
T00185
Symbol
recJ
Name
(GenBank) ssDNA exonuclease, 5'--> 3' specific, Mg dependent
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aci
Acinetobacter baylyi
Pathway
aci03410
Base excision repair
aci03430
Mismatch repair
aci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACIAD3500 (recJ)
03430 Mismatch repair
ACIAD3500 (recJ)
03440 Homologous recombination
ACIAD3500 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aci03400
]
ACIAD3500 (recJ)
DNA repair and recombination proteins [BR:
aci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACIAD3500 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACIAD3500 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACIAD3500 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CAG70146
UniProt:
Q6F719
LinkDB
All DBs
Position
complement(3424072..3425778)
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AA seq
568 aa
AA seq
DB search
MRTIQIKQRPLLTHPDQFQDVPEFIAHILARRGVDSIQQLDLKLKYLLKPTLKGLDTAIA
LIDQAIDQQQQIIIVGDYDADGATSTALMCLALKEMGARVDYIVPDRFKYGYGLTPAIAD
LAHQQCQPELLITVDNGISSHAGVEQAQQLGMKVIITDHHLTTKSAPDAEAVVNPNQLNC
PFPSKALAGVGVAFYLLAHLSSLRQAHHKPSCKITQYLDLVALGTYADVASLDYNNRILV
DAGLKRIQQQQCRAGILALLDIAKRDPSTLKAQDLGFVLGPRINAAGRMDSMNIGIECLL
ASDLETAYPIAEQLNRLNLERRQVETEMKQQALGYLEDIQLQHENIPPALVMFAENWHQG
VIGIVAGRLKEQFHRPSIVFAPDTDGEHIKGSARSIEGIHIRDTIEQVAEQHPHLVSHFG
GHAAAAGLTLKKSHFEEFKNVFTACIAQMDETLLQAVLWTDGSLPAQAIDLETVDWIERL
GPWGQKFPLPQFEGRFEVLDYRWLKDIHLKLKLGLGEYGSVDAIAFNAAQKFDFDPMKKH
VNLVYELDRNEFNGSVNLQLRILHLDQT
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacaattcaaatcaaacagcgaccgttactcacacatcctgatcaatttcaggat
gtgcccgaatttattgcgcatattttagcccgtcgaggtgtcgactctattcagcagtta
gatttaaagctgaaatatttgctcaagccaacattaaagggcttggatactgcaattgcg
ctgattgatcaagccatcgaccagcaacagcagattattattgtgggtgactatgatgca
gatggtgcaaccagtacggctttgatgtgtctagctttaaaagaaatgggcgcaagagtt
gattacattgtgcctgatcgctttaagtatggttatggcttaacccctgcaattgctgat
ctggcgcatcaacaatgtcaaccagagctgttgatcactgtcgataatggtatttcaagt
catgctggtgtagagcaagcacagcaactgggcatgaaagtgattattaccgatcatcac
ttaacgaccaaatctgcaccagatgctgaagccgtggttaatccgaatcaacttaattgt
ccgtttccaagtaaagcattggcaggggtcggggttgcattttatctgttggcacattta
tcgagcttaaggcaggcacatcacaaaccaagttgcaaaatcacgcaatatctggatttg
gtcgcattgggtacatatgccgatgtcgcgagcttagattataacaatcggattttggtc
gatgcaggtttaaaacggattcagcaacagcaatgccgtgctggcatactggcattactg
gatatcgctaaacgtgatccttcgacgttaaaagcacaagatttaggatttgtacttgga
ccacgcattaatgcagcaggtcggatggacagcatgaatatcggcattgaatgcctgctt
gcaagtgatctggaaactgcctatccgattgcagagcaactgaatcgacttaatcttgag
cgtcgtcaggtcgaaacggagatgaaacagcaggcacttggctatcttgaagatattcag
ttacagcatgaaaatattccgcctgccttagtcatgtttgcagaaaactggcatcaaggt
gtgattggaattgtggcgggacgtcttaaagagcagtttcatcgccccagcattgtattt
gcacctgatacggacggggagcatattaaaggatctgcccgttctatcgaaggtattcac
atccgcgatacgattgaacaggttgcagaacaacatcctcatttagtcagtcattttggg
gggcatgcggcggcggcgggcttaaccctgaaaaaaagtcactttgaagaatttaaaaac
gtattcacagcgtgtattgcgcaaatggatgaaactttgctgcaagcggtgctctggacc
gatggctctttgcctgcacaggctattgatctggaaactgtcgactggatcgagcgtcta
gggccttggggacaaaagttcccacttccacagtttgaaggacgttttgaagtgctggat
tatcgctggctgaaagatatacatctcaagttaaaacttggcttgggagaatatggctct
gtagatgcgattgcatttaatgcagcacaaaagtttgattttgatccaatgaagaaacat
gtcaatttggtatatgagctagatcgtaatgaatttaatggcagtgtaaatttacaactt
cgcatcttacatttagatcagacataa
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integrated database retrieval system
