Acidilobus sp. 7A: SE86_00945
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Entry
SE86_00945 CDS
T05595
Name
(GenBank) tRNA-splicing endonuclease subunit alpha
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
acia
Acidilobus sp. 7A
Brite
KEGG Orthology (KO) [BR:
acia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acia03016
]
SE86_00945
Enzymes [BR:
acia01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
SE86_00945
Transfer RNA biogenesis [BR:
acia03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
SE86_00945
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
PF0610-like_N
TSEN34_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
AMD31178
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All DBs
Position
194565..195107
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AA seq
180 aa
AA seq
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MRARLVGGVVVVPSIEDSRRLYSMGFYGRPIGAQKVRDPESITSPLILDPLEALYLSETR
VIEVYDSSERPLGAQELAERLGLTARQLKLYRVYRSLRSRGLTVRSGLKYGASFVAYRRG
PGLEHAPFIIHYFEPQEPFDPVELVRAGRLSHSVRKTFIVATEDPVKEEPYYIMLKWLRP
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
ataagggcaaggctcgtcgggggcgtggtggtagtcccgtccatagaggactcaaggaga
ctgtactccatgggcttctacggcaggcccataggggcccagaaggtcagggacccggag
tccataacgtcaccccttatactcgacccccttgaggctctctacctctcagagaccagg
gtgatagaggtctatgacagctctgagaggcccttgggggcccaggagctcgccgagagg
cttgggctgacggcgaggcagcttaagctctacagggtctacaggtccctgaggtcaaga
gggctcacggtcaggtcaggccttaagtacggggcctccttcgttgcctataggaggggc
ccagggcttgagcacgcgcccttcataatccactactttgagcctcaggagcccttcgac
ccggtggagctcgtgagggccggcaggctgagccacagcgtgaggaagacgttcatagtg
gccacggaggaccccgtgaaggaagagccatattatataatgcttaaatggcttcgtccc
taa
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