Acidilobus sp. 7A: SE86_01860
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Entry
SE86_01860 CDS
T05595
Name
(GenBank) hypothetical protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
acia
Acidilobus sp. 7A
Brite
KEGG Orthology (KO) [BR:
acia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acia03016
]
SE86_01860
Enzymes [BR:
acia01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
SE86_01860
Transfer RNA biogenesis [BR:
acia03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
SE86_01860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
AMD30348
LinkDB
All DBs
Position
complement(370293..370661)
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AA seq
122 aa
AA seq
DB search
MSVGNPYDEVLSFISRERDWAKAIRLIEQLGLDLETFIVYYDLRKRGKKVTIGPRPRTLI
YSLGPGRAAEVLILSEGTYVKPMDIVAWSERAVADAHEPVVAIVDETGGVTYYEARVIRG
LA
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgtcgggaacccctacgatgaggtcctaagcttcatatccagggagagggattgg
gctaaggcgataaggctcatagagcagctgggcctagaccttgagaccttcatagtatac
tatgatctgaggaagaggggcaagaaagtcacgatagggccaaggcccaggaccctcata
tatagtctgggtccaggcagggccgcggaggtgctcatattaagcgagggaacctatgtg
aaacccatggatatagtcgcgtggagtgagcgtgcagtggctgacgcccatgaaccagtt
gtagctatagttgacgagaccggcggcgtgacctattatgaagccagagtcattaggggc
ctggcctaa
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