Acidilobus sp. 7A: SE86_06840
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Entry
SE86_06840 CDS
T05595
Name
(GenBank) exonuclease
KO
K12589
exosome complex component RRP42
Organism
acia
Acidilobus sp. 7A
Pathway
acia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SE86_06840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acia03019
]
SE86_06840
Messenger RNA biogenesis [BR:
acia03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SE86_06840
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
SE86_06840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AMD31016
UniProt:
A0A0X8I9G1
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All DBs
Position
complement(1354057..1354902)
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AA seq
281 aa
AA seq
DB search
MSYTPYRVPVLSKIRSRNLISLYKKGIRSDQRDFMTPRNISVQLGVIDKADGSAWVRLGN
TQVLVGIKLEVGTPYRDTPNEGVLQVNSELAPVASPTFEPGPPDENAIELSRVIDRSLRD
PKAVDLGSLIIRPGERAWVLWIDVYVLDYDGNYFDASMLGVLAALMNTKVPDYEETESGE
IIIDRTKGSPLKLNRRVVLVTSAKIGDIILIDPNLDEELLADSRMVLAFDEQGTVVGMQK
TGLGGYTRDELMKIIDMSRKVSQVYFKLLDQALQNAGSQQR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgagctacacgccatacagggtgccagtgctgtccaaaataaggagcaggaacctcata
agcctctacaagaagggcataaggagcgaccagcgcgacttcatgacgccaaggaacatc
tcagtgcagctaggcgttatagacaaggctgacggctctgcgtgggtcaggctaggaaac
actcaggtgctcgtcggcatcaaacttgaggtcggtactccctatagggacactcccaat
gagggcgtcctccaggttaactctgagctcgcaccagtggcctcgcctaccttcgagccg
gggccgccggatgagaacgccatagagctgtcaagggttattgataggagcctcagagat
cccaaggctgtcgacctaggctcgctaataataaggcctggcgagagagcgtgggtgctg
tggatagatgtctacgtgctggactatgacggcaattactttgacgcaagcatgcttgga
gtgttggcagcgctcatgaacactaaggttccagattatgaggagacggagtcgggcgag
ataataatagatagaaccaagggctcgccgcttaagctcaacaggcgcgtggtgctcgtc
acaagtgccaagatcggcgatattatactgatagatcctaaccttgacgaggagctgctt
gctgacagcagaatggtcttagcgttcgacgagcagggaaccgtagttgggatgcagaag
acgggcctcgggggctacactagggatgagctgatgaagataatagacatgtcgaggaag
gtttcgcaagtttactttaaattgctggaccaagcactccagaacgccggaagccagcag
aggtga
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