KEGG   Acidilobus sp. 7A: SE86_06845
Entry
SE86_06845        CDS       T05595                                 
Name
(GenBank) exonuclease
  KO
K11600  exosome complex component RRP41
Organism
acia  Acidilobus sp. 7A
Pathway
acia03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acia00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SE86_06845
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acia03019]
    SE86_06845
Messenger RNA biogenesis [BR:acia03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     SE86_06845
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     SE86_06845
SSDB
Motif
Pfam: RNase_PH RNase_PH_C DUF1641
Other DBs
NCBI-ProteinID: AMD31017
LinkDB
Position
complement(1354899..1355627)
AA seq 242 aa
MHVRPAKFFDENGRRLDGRLPDEMRPVEMKVGVLRNADGSALVSYGKTKVLAAVYGPREP
SQRYTVLPDRASLFVRYHMAPFSTEERKSPVPTRRETEISKVLREALEPVVITDLFPRTA
IEVYIEVLQSDGGTRTASATAASLALADAGIPMRGLVAGVAVGKVDNVVVLDINEPEDNF
GEADMPVVAAPDLGLITLFQLNGVMTAEDVQRGLDMALKAISEVVEKEKQTLRSSVEEVE
VE
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcacgtaagaccggccaagttcttcgatgagaacggaaggaggctggacggcaggctc
ccagatgaaatgaggcctgtcgaaatgaaggtcggcgtcttaagaaacgctgatggctca
gccctagtgtcgtacggcaagacgaaggtactagcggcagtctacggtcctagggaacct
tcacagagatacactgtgctgccagacagagcttccctctttgtcaggtaccatatggcc
cccttctcgacagaggagcgcaagagcccggtgccaacaagaagagagacggagatatca
aaggttctaagggaggccctagagcctgtcgtcataactgacctcttcccacgcaccgca
atagaggtctacatagaggttctccaatccgacgggggcactaggactgcgagcgctacg
gcagcctcactagctctagccgatgccggaatcccgatgaggggtctcgtggcgggggta
gccgtcggcaaggtagataacgttgtcgtgttagacatcaacgagcctgaagacaacttt
ggtgaagctgacatgccggtcgtggctgcgcctgacctaggcctcataacgctctttcag
cttaacggcgttatgacagctgaggatgttcagaggggtcttgatatggcactcaaagct
ataagtgaggttgttgaaaaggagaagcagacgctgagaagctctgtggaggaggtagag
gtagagtga

DBGET integrated database retrieval system