Acidilobus sp. 7A: SE86_07145
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Entry
SE86_07145 CDS
T05595
Name
(GenBank) RNA-binding protein
KO
K07573
exosome complex component CSL4
Organism
acia
Acidilobus sp. 7A
Pathway
acia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SE86_07145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acia03019
]
SE86_07145
Messenger RNA biogenesis [BR:
acia03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SE86_07145
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
SE86_07145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
DUF7130
DUF5817
Zn_ribbon_3
Zn_Tnp_IS91
DZR
HypA
HVO_2753_ZBP
Zn_ribbon_PaaD
Cas12f1-like_TNB
RUBY_RBDX
Zn_ribbon_IS1595
Zn_ribbon_RPB9
DUF7129
Zn_ribbon_8
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AMD31054
UniProt:
A0A0X8I9L5
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All DBs
Position
1414871..1415476
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AA seq
201 aa
AA seq
DB search
MVPGDVIAVIEEYSEGQSVYVDQQMGVLRASAVGRLKLDNQAKVASVVTRRNVKGPRKGA
TVLGLVTQVKENLAFVDIYGEVALEPRPGGFIEYSGVLDGVITPESVGVEHIDDMLNYVR
PNDIVIARVMSTISPYLLSIKGPQFGVIYALCSKCGEMLTLENGTLKCPRCGNVESRKLS
TFVSSKLIRLDVRRLILRRFQ
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
gtggttccaggggacgttatagcggtgatcgaggagtactcagagggtcagagcgtctat
gtagaccagcagatgggcgtgctaagggcgtcagccgtgggcagacttaagctggacaac
caggccaaggtggccagcgtcgtcaccaggagaaacgttaagggacccaggaagggcgcc
acggtgttggggttggtaacgcaggttaaggagaacttggcgttcgttgacatctatggt
gaggttgccctagagccaaggccagggggcttcatagagtactccggcgtgctcgatgga
gttataacccctgagagcgtcggagttgagcatatagacgatatgctcaactacgtgagg
ccaaacgacatagtaatagccagggttatgagtaccataagtccctacctgctcagcata
aagggacctcagtttggcgtaatctacgccctttgctctaagtgcggcgagatgctcacc
cttgagaacggcaccctcaagtgtcccaggtgcggtaatgtcgagagcagaaagctctcc
accttcgtctcttcaaagctgataaggcttgacgtaaggaggcttattctaaggaggttc
cagtag
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