Aliarcobacter cibarius: ACBT_0190
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Entry
ACBT_0190 CDS
T06760
Symbol
hup1
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
acib
Aliarcobacter cibarius
Brite
KEGG Orthology (KO) [BR:
acib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acib03032
]
ACBT_0190 (hup1)
03036 Chromosome and associated proteins [BR:
acib03036
]
ACBT_0190 (hup1)
03400 DNA repair and recombination proteins [BR:
acib03400
]
ACBT_0190 (hup1)
DNA replication proteins [BR:
acib03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ACBT_0190 (hup1)
Chromosome and associated proteins [BR:
acib03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ACBT_0190 (hup1)
DNA repair and recombination proteins [BR:
acib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ACBT_0190 (hup1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QKJ26174
UniProt:
A0A7L5JLV5
LinkDB
All DBs
Position
complement(210977..211258)
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AA seq
93 aa
AA seq
DB search
MNKNEFIDAVAAKSGLTKKDSKTALDAVLDTITEALEKRDSVAFVGFGTFTTASREARTA
KVPGTDRTVNVPATIVAKFKVGKALKEAIANSN
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatgaatttattgatgcagttgctgcaaaatctggattaacaaaaaaagat
tctaaaactgcactagatgctgtgttagatactattacagaagcattagagaagagagat
tctgttgcttttgtaggttttgggacattcacaactgcttcaagagaagctagaactgca
aaggttccgggaactgatagaactgttaatgtaccagctacaattgttgcaaaatttaaa
gttggaaaagctttaaaagaggctattgctaactctaattaa
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