Aliarcobacter cibarius: ACBT_0462
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Entry
ACBT_0462 CDS
T06760
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acib
Aliarcobacter cibarius
Pathway
acib03420
Nucleotide excision repair
acib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACBT_0462
03430 Mismatch repair
ACBT_0462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acib03400
]
ACBT_0462
Enzymes [BR:
acib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACBT_0462
DNA repair and recombination proteins [BR:
acib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACBT_0462
MMR (mismatch excision repair)
Other MMR factors
ACBT_0462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
Pilin_PilX
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QKJ26426
UniProt:
A0A7L5JMU9
LinkDB
All DBs
Position
497309..499363
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AA seq
684 aa
AA seq
DB search
MSENLLSSLNKSQQDAAQHIDGPLLILAGAGSGKTKTITTRLAFLISIGIDPKSILTLTF
TNKAANEMRERAYSLLNSEELNTPPLLCTFHKFGLLFLKFHISELDRKNNFIIIDSDDKR
RVLKSINKDIPSALLSSEISKYKNSIMSPIEVKAQAQGKLYTEIADIYALYEEHLLKNNL
VDFDDLLLLPYKILKNNEKLAKDISKKYQYIMVDEYQDTNELQYRLLRLLCTSHNNLCVV
GDDDQSIYGWRGATIKNILNFNEHFDEATIVKLEENYRSTDTILNHANALIEHNRDRLGK
KLVGTKDKGSSVKVYESNDENDESRKIVEDIKSLLASGEHAKDIAILFRVNALSRSLEEG
FNKAGLNYKLVGGMKFYERTEIKDLIAYFRILTNLSDNFSIKRVINKPKRGIGATTIDKL
EEKANELNISIFDLIQDSTPDELSAVVGKKNSRTLKVFEASILDLREIMNESRMRLLDSF
EDTFDYRASYDNLPDGFERQANIDEFYGYIRDYFIQNPHLDLKDFLNEIALESQNDEYSN
ESISMMSIHASKGLEFKHLFIIGLEEGFFPIIGDGTDIEEERRLGYVALTRAMDNLTLSF
VHSRFYKGKRTQLNKSRFLVESGLVKGSLVIEKQSGFKKGDMVNHKIFGQGRVEKAVNAG
KDYKLTINFGGQKREILSSFVEKV
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaatttattaagctcgttaaacaaatctcaacaagatgcagcacaacatatt
gatggaccacttttaattcttgcaggagctggaagtggaaagactaaaacaatcacaact
agattggcttttttaatatctattggaatagatccaaaatcaattttaactttaacattt
actaataaagcagcaaatgagatgagagaaagagcttattctcttttgaattcagaggaa
ctaaatacgccacctcttttgtgtacttttcataaatttggattgttgtttttaaagttt
catataagtgagttggacagaaaaaataattttataatcatagatagtgatgataagaga
agggttttaaaatctattaataaagatataccatcagcacttttatcaagtgaaatatca
aaatataaaaattcaataatgtctccaattgaagtaaaggcacaagcacaaggcaaatta
tatacagaaattgcagatatatatgctttatatgaagagcatttattaaaaaataattta
gttgattttgatgatttattacttctcccatataaaatattaaagaataatgaaaaatta
gcaaaagatattagtaaaaaatatcaatatattatggtagatgagtatcaagatacaaat
gagttacaatataggctattaagattattgtgtacaagtcacaataatttatgtgttgta
ggagatgacgaccaatcaatttatggttggagaggtgctacaataaaaaatattttaaat
tttaatgagcattttgatgaagcaactatagtaaaacttgaggagaattatcgttcaaca
gatacgattttaaatcatgcaaatgctttaatagaacataatcgtgatagactaggtaaa
aaattagttggaacaaaagataaaggtagttctgtaaaagtttatgaatcaaatgatgaa
aatgatgaatcaagaaaaatagttgaagatataaaatcacttttagcaagtggagaacat
gcaaaagatattgcaatattatttagagtaaatgcactaagtcgttctttagaagaagga
tttaataaagcggggttaaattataaacttgttggtggaatgaaattttacgaaagaact
gaaattaaagatttaatagcatattttaggattttgacaaatttaagtgataacttttct
ataaaaagagtaattaataagccaaaaagaggaataggggcaactactatagataaactt
gaagaaaaagcaaatgaacttaatatttcaatttttgatttaattcaagattcaactcca
gatgagttaagtgcagtagtaggtaaaaagaattctagaacattgaaagtttttgaagct
tctattctagatttaagagagataatgaatgaatcaagaatgagattattagatagcttt
gaagacacttttgattatagagcctcttatgataacttaccagatggatttgaaagacaa
gcaaatattgatgagttttatggatatattagagactattttattcaaaatccacattta
gatttaaaagattttttaaatgaaattgcattagagagtcaaaatgatgagtactctaat
gaatctattagtatgatgagtatacatgcttcgaaaggtttagaatttaaacatcttttt
attattggattagaagaaggttttttcccaataattggagatggaactgatatagaagaa
gagagaagattgggttatgttgctttaacaagggcaatggataatttaacattatcattt
gttcattctcgattttacaaagggaaaagaacacaactaaataagagtagatttttggtt
gaaagtggactagtaaaaggtagtttagtaatagaaaagcaatctggatttaaaaaaggt
gatatggtaaatcataagatttttggacaaggaagagttgaaaaagctgtaaatgcaggt
aaagattataaactcacaattaattttggtggacaaaaaagagaaatattatcatctttt
gtagaaaaggtttaa
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