Aliarcobacter cibarius: ACBT_1927
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Entry
ACBT_1927 CDS
T06760
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
acib
Aliarcobacter cibarius
Pathway
acib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACBT_1927 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acib03021
]
ACBT_1927 (rho)
03019 Messenger RNA biogenesis [BR:
acib03019
]
ACBT_1927 (rho)
Transcription machinery [BR:
acib03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACBT_1927 (rho)
Messenger RNA biogenesis [BR:
acib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACBT_1927 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
ATPase_2
S1CSD-TOTE-2
Spore_III_AA
AAA_22
AAA
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
QKJ27822
UniProt:
A0A7L5JRI5
LinkDB
All DBs
Position
complement(1930962..1932284)
Genome browser
AA seq
440 aa
AA seq
DB search
MEESKEEIKSKTTKKTRTHIPVDGYKIEQLRELPIETLLDIANDLDVENPQELKRQDLMF
MILASQIDAGGFILFTGILEIKEGGFGFLRAIDGNFSDTSNDSYVSATQIRKFALRTGDI
VTGQVRPPNKDSEKYNALLKIEAINYLPVKDSKNRPLFDNLTPLYSTKKFNFEYESQKMT
GRMLDLFAPMGRGQRGLIVAPPKTGKTELLKELAHAISKNHPEVTLMVLLIDERPEEVTD
MQRSVKGEVYSSTFDLPAQNHVRVAEIVIEKAKRLVEMKKDVVILLDSITRLARAYNTVT
PSSGKVLSGGVDANALHKPKRFFGAARNIEEGGSLTIVSTALIETGSKMDEVIFEEFKGT
GNSEVVLSRNAANKRVYPALDIIKSGTRKEELLLSSDILQKTWILRNAISQMDEVEALKF
LYSKMQKTKNNEEFFASMNE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtctaaagaagaaataaaatcaaaaactacaaaaaaaacaagaacacatata
cctgttgatggttacaagatagaacaactaagagagttacctatagaaactcttcttgac
attgcaaatgatctagatgttgaaaatcctcaagaattaaaaagacaagatttaatgttt
atgatacttgcatctcaaattgatgctggtggatttattctttttacaggaattttagaa
ataaaagaaggtggctttggatttttaagagcaattgatggaaatttttcagatacttca
aatgactcttatgtaagtgctacacaaattagaaaatttgcattaagaacaggtgatatt
gtaactgggcaagttagacctccaaataaagatagtgagaagtataatgcccttttaaaa
attgaagctataaattatcttcccgtaaaagattcaaaaaatagaccattatttgataac
ttaactcctttgtactcaacaaaaaaatttaattttgaatatgaatcacaaaaaatgaca
ggaagaatgcttgatttatttgctcctatggggagaggtcaaagaggattgattgttgct
ccaccaaaaactggtaaaacagaattattaaaagaactagctcatgcaataagtaaaaat
catccagaagttactttaatggttctattaatagatgaaagaccagaagaagttactgat
atgcaaagaagtgtaaaaggtgaagtttacagttcaacatttgatttacctgctcaaaat
catgtaagagttgctgaaattgttattgaaaaagcaaaaagacttgttgaaatgaaaaaa
gatgttgttatattacttgattcaattactagactagccagagcttacaatactgtaact
ccaagttctggaaaagttctttctggtggagttgatgcaaatgcacttcataaaccaaaa
agattttttggagcagctagaaacattgaagaaggtggaagtttaactattgtatcaact
gctttaatagaaacaggttcaaaaatggatgaagttatttttgaagaatttaaaggaaca
ggtaactctgaagtagtgctaagtagaaatgctgcaaataaaagggtatatccagctctt
gatatcattaaatcaggtacaagaaaagaagaacttcttttatcttcagatatattacaa
aaaacatggattttaagaaatgctatttcgcaaatggatgaagttgaagcacttaaattc
ttatattcaaaaatgcaaaaaacaaaaaataacgaagaattttttgcatctatgaatgaa
taa
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