Aliarcobacter cibarius: ACBT_1968
Help
Entry
ACBT_1968 CDS
T06760
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acib
Aliarcobacter cibarius
Pathway
acib03030
DNA replication
acib03430
Mismatch repair
acib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACBT_1968 (dnaE)
03430 Mismatch repair
ACBT_1968 (dnaE)
03440 Homologous recombination
ACBT_1968 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acib03032
]
ACBT_1968 (dnaE)
03400 DNA repair and recombination proteins [BR:
acib03400
]
ACBT_1968 (dnaE)
Enzymes [BR:
acib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACBT_1968 (dnaE)
DNA replication proteins [BR:
acib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACBT_1968 (dnaE)
DNA repair and recombination proteins [BR:
acib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACBT_1968 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QKJ27862
UniProt:
A0A7L5JRM8
LinkDB
All DBs
Position
complement(1963880..1967443)
Genome browser
AA seq
1187 aa
AA seq
DB search
MSQIPQFTHLHLHTEYSLLDGANKIKPLAKKLKSFGMTSVAMTDHGNMFGAIDFYNAMRA
EGIKPIIGMEAYIHNSDDIADKTNRQRFHLCLYAKDEIGYKNLMYLSSKAYMEGFYYYPR
INKKLLKEHSTGLVCSAACLQGEVNWHLNTQSERNVKNGAKGYEEAKRISLEYKEIFGED
FYLEIMRHGIGDQLFVDDQILRISKETGIKIVATNDTHYLEQKDADAHEAFMCIAMNKLY
DDPNRLRHSVHEFYLKSQEQIYKLYADIPEAIEATQEIADKCNLTIKLGNPTPPNFKFTR
DKLKELNLEIPEPENEYSLENDKVLFSYECRIGLEDRLKLVPLEKHEEYKARLETEINII
NNMKFPGYMLIVWDFVKVAKDMGIPVGPGRGSAAGSLVAYSLKITDIDPIPYGLLFERFL
NPERVSMPDIDMDFCQSRRGEIIDYVVNQYGRANVAQIITFGKLLAKGVIRDVARVLDMP
YAKADAMAKLIPDELGIDLKNSWEKEPKIKELCEADPLAARVWEYALALEGLNRNAGTHA
AGVVISNEPLWNKTPLFKPSGLDTLATQYNGKYIEDVDLIKFDFLGLKTLTVIDEAIKLI
KQRHGKVIDFKTIDVNDKGVYDLIQTGDTLGLFQIESDGMQDLCKRLKPSNFEDIVAVLA
LYRPGPMESGMLDDFIERKHGRAKIDYFHDELEEALKPILENTYGVIVYQEQVMQIVQSV
GGFSLGGADLVRRAMGKKIKEEMDRLKGQFADGAEEKGFTRAYAEELFDLIVKFAGYGFN
KSHSAAYALVTFYTSYLKCYYPAEFMAALLTLEKDNTDKVVRYVDEVKRLNLELFPPDIN
KSDLVFSATNINGKEVVMFGMGAIKGAGDVAIKSILQAREKGKFNDLSDFISRIDASKVN
KRVIESLAKAGVFDSLGYSRNALLSQIEKIVDGASKASNAKKMSTGSLFGDSDELTKIEI
ELDNLPEYSPKEILELEKASLGFYVSGHPLDEYKEQIEKINYTLSSSIDELEDGSQILIV
GKVEEITEKISKKGGKFGIISVLDYHGTVEFMLFEDRLKELQENFDLNEPIAIKVRISKN
EQFTRMSVLKIETIFDAQKEKVKIKQKEVVEPPLIIAIPFSEDELIIHDLFDLVVNNQGK
RELRILIKSKLADLELESAIKVNSDIEKVINNIKGAYIVDVTDTSNK
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaataccgcaatttacacatttacatctacatacagaatattcgcttctagat
ggagcaaacaagataaaaccacttgcaaaaaaactaaaaagctttggtatgacaagtgtt
gccatgactgatcatggaaatatgtttggagcaatagatttttataatgctatgagagct
gaaggtataaagccaattattggaatggaggcttatatacacaatagtgatgatatagca
gataaaacaaatagacaaagatttcatttatgtttatatgcaaaagatgaaattggatat
aaaaatcttatgtatcttagttcaaaagcatatatggaaggattttattactatccaaga
ataaataaaaagttattaaaagaacattcaacaggtctcgtttgtagtgccgcatgtcta
caaggtgaggtaaattggcatttaaatactcaaagtgagagaaatgtaaaaaatggtgca
aaaggatatgaagaagctaaaagaatttctttagagtacaaagagatatttggtgaagat
ttttatttagagattatgagacatggaattggggatcaactttttgtagatgaccaaatt
ttaagaatttcaaaagagactggaataaaaatagttgctacaaatgatactcactattta
gaacaaaaagatgcagatgcacatgaggcttttatgtgtattgcaatgaataaactatat
gatgatccaaatagattaagacatagtgttcatgagttttatttaaagtcgcaagaacaa
atttataaactttatgcagatattcctgaagctattgaagcaactcaagaaatagctgat
aaatgtaatcttactataaagttaggaaatccaactcctccaaatttcaaatttacaaga
gataagttaaaagaattaaatcttgaaatacctgaaccagaaaatgaatattctttagaa
aatgataaagttttattttcttatgaatgtagaattggtttagaagatagattaaagctt
gtacctcttgaaaaacatgaagagtataaagctagattagaaacagagataaatattata
aataatatgaaatttccaggatatatgttaattgtttgggatttcgttaaagttgcaaaa
gatatgggaattccagttggtccaggaagaggaagtgcagctggaagtttagttgcgtat
agtttaaaaattacagatattgacccaattccttatggattactttttgaaaggttttta
aatccagagagggtttcaatgcccgatattgatatggatttttgtcaaagtagacggggg
gagattattgattatgttgtaaatcaatatggacgagccaatgttgcacaaattattact
tttggtaagcttttagcaaaaggggttataagagatgttgctagggttcttgatatgcct
tatgcaaaagcagatgcaatggcaaaattaattcctgatgaattaggaatagatttaaaa
aactcttgggaaaaagagccaaaaataaaagaactttgtgaagctgatcctctagcagct
agagtttgggaatatgcattggcactagaaggattaaatagaaatgctggaactcatgct
gctggagttgttatatcaaatgagccactttggaataaaactccactttttaaaccaagt
ggacttgatactttagctactcaatataatggaaaatatattgaagatgttgatttgatt
aaatttgactttttaggattaaaaactcttacagttattgatgaagctataaaattaatc
aaacaacgtcatggaaaagttatagattttaaaactatagatgtaaatgacaaaggtgtt
tatgatttaattcaaactggagatactttaggactatttcaaatagagtcagatggtatg
caagatttatgtaaaagattaaaaccatcaaactttgaagatattgttgccgttcttgct
ttatatagaccaggacctatggaatcaggaatgcttgatgactttattgaaagaaaacat
ggacgtgcaaaaattgattactttcatgatgaacttgaagaagctttaaaaccaatactt
gaaaatacttatggagtaattgtttatcaagagcaggtaatgcaaattgttcaaagtgtt
ggaggcttttctcttggaggtgctgaccttgtaagaagagcaatgggtaaaaagattaaa
gaagagatggataggctaaaaggtcagtttgctgatggagctgaagaaaaaggatttaca
agagcctatgcagaagaactttttgatttgattgtaaaattcgctggatatggatttaac
aaatctcactcagcagcttatgctttagttactttttatacttcttatttaaaatgttat
tacccagcagaatttatggcagctcttttaacacttgaaaaagacaatacagataaggtt
gtaagatatgttgatgaggttaaaagattaaatcttgaacttttcccgcctgatataaat
aaatcagatcttgttttctcagcaacaaacataaatggaaaagaagttgttatgtttggt
atgggagctataaaaggtgctggtgatgttgctattaaatctattttacaagcaagagaa
aaaggtaaatttaatgatttatcggattttatttcaagaattgatgctagtaaagtaaat
aaaagagttatagaatctttagcaaaagcaggagtttttgatagtttaggttattctaga
aatgcacttttaagccaaatagaaaaaattgtggatggtgcttcaaaagcttcaaatgca
aaaaaaatgtcaacaggttcactttttggagatagtgatgaacttacaaaaatagagata
gaattagataatttacctgaatattctccaaaagaaattcttgaacttgaaaaagcaagt
cttggattttatgtttcaggacatcctttggatgagtataaagaacagatagaaaaaata
aattatactttatcttcaagtattgatgagcttgaagatggaagtcaaattttaattgtt
ggaaaagttgaagagataactgaaaagatttctaaaaaaggtggaaagtttggaattatt
tctgtacttgattaccatggaacagttgaatttatgctttttgaagatagattaaaagag
cttcaagaaaattttgatttaaatgagccaattgctataaaggttcgaatatcaaaaaat
gaacaatttacaagaatgagtgttttaaaaattgagactatttttgatgcacaaaaagaa
aaagttaaaataaaacaaaaagaggttgttgaaccacctttaattattgctattcctttt
agtgaagatgaattaataattcatgatttatttgatttagttgtgaataatcaaggaaaa
agagaattaagaatcttaataaagtctaaattagcggatttggaattagaaagtgcaata
aaagtaaatagtgatattgaaaaagtaataaataatataaaaggagcatatatagtagat
gttacagatacttctaacaaatga
DBGET
integrated database retrieval system
