Aliarcobacter cibarius: ACBT_2283
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Entry
ACBT_2283 CDS
T06760
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acib
Aliarcobacter cibarius
Pathway
acib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACBT_2283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acib03019
]
ACBT_2283
03009 Ribosome biogenesis [BR:
acib03009
]
ACBT_2283
Enzymes [BR:
acib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACBT_2283
Messenger RNA biogenesis [BR:
acib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACBT_2283
Ribosome biogenesis [BR:
acib03009
]
Prokaryotic type
rRNA helicases
ACBT_2283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QKJ28163
UniProt:
A0A7L5JSE7
LinkDB
All DBs
Position
complement(2292939..2294459)
Genome browser
AA seq
506 aa
AA seq
DB search
MTFKDFNFKELLQKAIEEAGFKEPSPIQVEAIPHVLQGKDIVGQAHTGTGKTAAFGLPIL
NKLGKKAGEALVIVPTRELAMQVSDELFRFGKHLGINTATVYGGQSYSRQIKLLENSNVI
VATPGRLLDLLRNEQINIKPNFVVLDEADEMLDMGFLDDIKDIFTYLPESRQTLLFSATM
PVAIKNLAKTILKEPEFITITQANVTNVNITQTFYVVDEKERDDALIRLFDYKNPKKSII
FCRTKKDVDRLSTFLVSQGFMAKALHGDMEQKQREEAIKAFKSSKLEVLIATDVAARGLD
VNDVTHVFNYHLPFDGESYVHRIGRTGRAGKDGIAISIVTPHEFRTLQRIEKTIGTKLES
RVVPNISTVKQKKIDELKQTILDQEIKDYAITLVEDLKEEFDISTIAFKLASIIASKTYV
KGNNNIGKSEIDIKKLTELLSKNDRGDDRNGSRNRGGRRDNFRRDRKRSDRDESSSSSRP
RQRSSSSSAKPSGDRPAKTQRSRRRD
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtgacttttaaagatttcaattttaaagaactactacaaaaagcaatagaagaagctgga
tttaaagaaccaagccctatacaagttgaagcaattccacatgttttacaaggtaaagat
atagttgggcaagcccatacaggaactggtaaaacagctgcatttggtcttccaatttta
aataagttaggaaaaaaagctggtgaagcattagttattgttcctacaagagaacttgcg
atgcaagtatcagacgaacttttcagatttggaaaacatttaggaattaatacagcaaca
gtttatggaggacaatcatactcaagacagataaaattacttgagaactcaaatgttatt
gttgcaacacctggaagacttcttgatttattaagaaatgaacaaattaatataaaacca
aattttgtggttttagatgaagctgatgaaatgttggatatgggattcttagatgatatt
aaagatatttttacataccttcctgaatctagacaaactttacttttctcagcaactatg
ccagtagctattaaaaatttagcaaaaactattttaaaagagccagaatttataacaatt
acacaagctaatgtaacaaatgttaatattactcaaactttttatgttgttgacgaaaaa
gaaagagatgatgcattaataagactttttgattataaaaatccaaaaaaatctattatt
ttttgtagaacaaaaaaagatgttgatagattatctacatttttagtatctcaaggattt
atggcaaaagctcttcatggtgatatggaacaaaaacaaagagaagaagctataaaagca
tttaaatcttcaaaattagaagttttaatagcaacagatgtagctgcaagaggactagat
gtaaatgatgtaactcacgtatttaattatcatcttccttttgatggtgaatcttatgtt
catagaattggaagaactggaagagctggaaaagatggaattgctatttcaatagttaca
ccacatgaatttagaactcttcaaagaattgaaaaaacaattggtactaaattagaatca
agagttgttccaaatatatcaactgttaaacagaaaaaaattgatgaacttaaacaaaca
attttggatcaagagataaaagattatgcgattacattagttgaagatttaaaagaagag
tttgatatctctacaatagcatttaaacttgcttcaattattgcttctaaaacttatgtt
aaaggtaataataacataggtaaaagtgaaattgatatcaaaaaacttacagaacttctt
tctaaaaatgatagaggtgatgatagaaatggttctagaaatagaggtggaagaagagat
aacttcagaagagatagaaaaagaagtgatagagacgaatctagtagctcttctagacct
agacaaagaagttcaagttcatctgctaaaccaagtggtgatagacctgcaaaaactcaa
agaagtagaagaagagattaa
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