Acinetobacter sp. Ac-14: IOD65_04105
Help
Entry
IOD65_04105 CDS
T11083
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
acic Acinetobacter sp. Ac-14
Brite
KEGG Orthology (KO) [BR:
acic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acic03016
]
IOD65_04105
Enzymes [BR:
acic01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
IOD65_04105
Transfer RNA biogenesis [BR:
acic03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
IOD65_04105
Prokaryotic type
tRNA splicing ligases
IOD65_04105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
QOW99858
LinkDB
All DBs
Position
complement(838804..840009)
Genome browser
AA seq
401 aa
AA seq
DB search
MGIQKILNKEALYGVPVKIFTQDIDSESIEQLKKMAQLQFIYSHIAVMPDVHVGKGATVG
SVIPTKHAIIPAAVGVDIGCGMNAIRLSLKASQLPDNLSRLRDAIERKVPVGFALHKQVK
AKASSIIPLEKCLEPIIKKHPGLVRMLRQFDATWQKQLGTLGGGNHFIELCIDENQDVWV
MLHSGSRGLGNVIGTYFIELAKKEAQHRFGHVPDKDLSYFAEGSKSFDDYVEAVEWAQEY
AFENRKEMMRLILEAIRPPLPSFQMTKEAINCHHNYVSRETHFGENLLITRKGAIRAGLD
ELGIIPGSMGARSYIVKGKANPESFCSCSHGAGRKMSRSKAKVLFNQQDLIEQTQGIECR
KDSGVVDEIPSAYKDIDEVMANQSDLIEVVHTLKQVLCIKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacaaaaaatattaaacaaggaggcactctatggtgtccctgttaaaattttc
actcaagatatagatagtgaaagtatagaacaactcaaaaaaatggctcagctgcaattc
atctattctcacattgcagttatgcctgatgtgcatgtgggtaaaggcgctactgtaggt
agtgttattccaaccaaacacgccattattcctgctgctgtaggagttgacattggatgt
gggatgaatgcaattcgcttgagtttaaaggcttcacaattacctgataacttaagtcgt
ttgcgtgatgcaattgaacgtaaagtccctgttggctttgctttgcataaacaagtcaaa
gcgaaagcttctagcattattccacttgaaaaatgcttagaaccaattatcaaaaagcat
cctggtcttgtccgaatgcttcgacaatttgatgcaacatggcaaaagcaacttgggact
ttgggtggtggtaatcactttatagagttatgtattgatgagaatcaagacgtatgggta
atgctacattcaggtagcagagggcttggtaatgttattggtacttactttattgagtta
gccaaaaaagaagctcagcatcgctttggccatgttcctgataaagacttaagttatttt
gctgaaggctcaaaaagttttgatgattatgtagaagctgtagagtgggcacaagaatat
gcttttgaaaaccgcaaagagatgatgcgattaattttagaagcgatccgccctcctctc
ccttcttttcaaatgacaaaagaagcgattaattgtcatcataattatgtaagccgtgaa
acacattttggcgaaaatctattgattacccgaaaaggtgcaattagagcaggcttagat
gagttaggtattattccaggttcaatgggagcacgatcttatatcgttaaaggcaaagca
aatcctgaatcattttgttcttgttctcatggcgctggtcgcaagatgagcagaagtaaa
gcaaaagttctttttaatcagcaagatcttattgaacaaacccaaggtattgaatgccgt
aaagacagtggcgttgtcgatgaaattccaagcgcctataaagacattgatgaagtcatg
gcgaatcagtcagacctcattgaagtcgttcacacacttaaacaagttttatgtattaaa
ggttaa
DBGET
integrated database retrieval system
