Acinetobacter sp. Ac-14: IOD65_11575
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Entry
IOD65_11575 CDS
T11083
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acic Acinetobacter sp. Ac-14
Pathway
acic03030
DNA replication
acic03430
Mismatch repair
acic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IOD65_11575 (dnaE)
03430 Mismatch repair
IOD65_11575 (dnaE)
03440 Homologous recombination
IOD65_11575 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acic03032
]
IOD65_11575 (dnaE)
03400 DNA repair and recombination proteins [BR:
acic03400
]
IOD65_11575 (dnaE)
Enzymes [BR:
acic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IOD65_11575 (dnaE)
DNA replication proteins [BR:
acic03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IOD65_11575 (dnaE)
DNA repair and recombination proteins [BR:
acic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IOD65_11575 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QOW97810
LinkDB
All DBs
Position
2429364..2432927
Genome browser
AA seq
1187 aa
AA seq
DB search
MQFVHLGIYTEFSITESIVRIPDLVNAAVKDEMPALALTDLSNLHAAVKFYNSCLKKGIK
PLLGSTIRLDDAQHRATLLAMSNVGWKSLTEIVSRGFIEGQQLSIPCVKKEWVLEQHQDI
IVLLGQHSDVGQMLCSSNPQKAAPLLEAWIEKFGNRVYLALTRTDRPGEEDFIQEAAKLA
AQYNVGVVAHNDVHFVEKEDFEAHEARVCIADGYVLADDRRPRLYSPEQHFKTSDEMIEL
FSDIPSAIENTYNIAKRCNVSLQLGTYFLPDYPIPDGFTIDTYFEHLSKVGLEERLDYLY
PVEKRGEDWPEIRKPYDERIDYEVGIILKMGFPGYFLIVMDFIQWAKNNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVSRTYGRE
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMVPTKPLGVDLATAIEMEPQLKDI
VTNPSNPDNDDASEIWEMALKLEGITRNTGKHAGGVVIAPGKITDFSAVLCDEDGTSRVA
QYDKDDVEAAGLVKFDFLGLRNLTVIEDAIQNINKNRDSNDPLIISHVPLDDAKAYSVFA
DANTTAVFQFESVGMKRMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGDFEYL
HPLLEGVLEPTYGIMVYQEQVMQTAQICAGYTLGGADLLRRAMGKKKPEEMVKQRQIFLA
GAAEKGIDESTANHIFDYMEKFAGYGFNKSHAAAYALVAYHTAWLKAHYPAEFMAAVMSS
EMQNTDSVVFLIDDCRNNGLEVLPPSVNMSTYHFHASDDKTIVYGLGAIKGVGEQAMQSV
IDSRRQFGPYTDLFDFCHRIDLKKINKRTLEALIRAGALDCLGIERASLMAQLPEAVQAA
EQARSNRESGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRQE
LKAFIPVKLNEITATRRGVTTVYAGLVIDVANFPNRVVIVLDDGTARIEVSCNHERFQRF
KDIIQVERVVVFEGEIYEREGFERPMGRLTKAFTLNEIRQKRANSIQIKLTEEFMQATLA
KDLQNIILPFCNVDMHQHITLQLQIDQPYAQAELQLGPQWKVAPLDELLAKLRDYFGKDN
IYIEYQVKSKAAKAAEPTRPQTVASPPADMTMDDALDLYQSEVSQYS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgttcatctcggtatttatacagaattttcgattacagagtcgatagttcgc
atacctgacttggtcaacgctgcggttaaagacgaaatgcccgcgctggcattaaccgat
ctatcaaaccttcatgcagcagtaaaattttataattcttgtttaaaaaaagggattaag
ccgcttttaggtagcacaatccgccttgacgatgctcaacatcgtgcaactttacttgca
atgagtaatgtaggctggaaaagtctaaccgaaatcgtttcacgcggttttattgaaggt
caacaacttagtattccatgtgtaaaaaaagaatgggtacttgaacagcatcaagatatt
attgttttacttggccaacatagtgatgtgggtcagatgctttgctcatctaaccctcaa
aaagccgctccccttttagaagcatggatcgaaaaatttggtaaccgtgtttatctggct
ttaacacgtaccgatcgtcctggtgaagaagactttattcaagaagccgctaaacttgct
gctcaatataatgtgggtgtagttgcgcataatgatgtgcactttgtagaaaaagaagat
tttgaagctcacgaagcccgtgtttgtattgctgatggctatgtattagcagatgaccgt
cgtccacgcttatatagtcctgagcaacattttaaaacctcggacgaaatgattgagttg
ttttcagatatcccaagtgctatcgaaaacacctataacattgcaaaacgctgtaatgtt
agcctacaacttggcacctactttttacctgactatccaattccagatggtttcaccatc
gacacttactttgagcatttgtctaaagtaggtttagaagaacgtttagattatctctac
cctgtcgaaaaacgtggcgaagattggcctgaaattcgtaaaccttacgatgaacgaatt
gattacgaagtcggcattatcctcaaaatgggttttcctggttacttccttatcgtcatg
gacttcatccagtgggcaaaaaataatggcgttccggtaggaccaggccgtggttcaggt
gcgggttcactcgttgcctatagcttaaaaattactgaccttgatcctcttcgttacgat
ctacttttcgaacgtttcttaaacccagaacgtgtttcgatgcccgactttgacgtcgat
ttctgtattgccggacgtgaccgcgtcattgattatgtttcccgtacctatggacgtgaa
gccgtatcacaaattgcaactttcggtacgatggcagcaaaaggtgcaattcgcgacgtt
gcccgtgtattaggtaaatcttacggtttagctgaccgtatctcaaaaatggtacctact
aaaccgctcggtgtggacttagccactgctatcgagatggaacctcagcttaaagatatc
gttaccaatccatctaaccccgataatgatgatgcgagtgaaatctgggaaatggcttta
aaattggaaggtatcactcgaaatactggtaaacatgccggcggtgttgttattgcacca
ggtaagattaccgatttctcagctgtgctttgtgatgaagatggaaccagccgtgttgct
caatatgataaagacgatgtagaagcagcaggtctcgtcaaattcgacttcttgggttta
cgtaacttaaccgttattgaagacgcaattcaaaatattaataaaaatcgcgatagtaat
gatccgctcattatttcgcatgttccacttgatgatgctaaagcctattctgtctttgcc
gatgcaaatacaacagcggtattccagtttgaatccgtcggcatgaaacgaatgctcaaa
gaagcacgtccaagtaaatttgaagagattattgcgttcgtatcattgtaccgtcctggt
ccaatggatcttattcctgactttattcaccgtatgcatggtggagattttgaatatctt
cacccacttcttgaaggtgtattagagccaacttacgggattatggtttaccaagaacag
gtgatgcagaccgcacagatctgtgcgggttatacgctcggtggcgcggacttactacgt
cgtgcaatgggtaaaaagaaacctgaggagatggttaagcagcgccaaattttcttggca
ggtgctgcagaaaaagggattgatgaaagtacagccaaccatatctttgactatatggaa
aagttcgcaggctatggtttcaacaaatctcacgccgcagcttatgccctcgtagcctac
catactgcatggttaaaagcacattatcctgctgagtttatggcagcagtaatgtcatcg
gaaatgcagaacaccgacagtgttgtatttttaattgatgactgccgaaataatggccta
gaagttttaccaccatcagtcaatatgtcgacttatcatttccatgcgagcgatgataaa
actattgtgtatggtttaggtgcaattaaaggcgttggcgaacaagcgatgcagtcagtt
attgactctcgtcgacaatttggtccttatacagatctattcgatttttgccatcgtatt
gatttgaagaaaatcaataagcgtactcttgaagctttaattcgtgcaggtgcactcgat
tgcttaggaattgaacgcgcaagcttaatggcgcaattacctgaagctgttcaagctgcc
gaacaagcgcgcagtaaccgtgaaagcggtattatggatttatttggtgaggttgaagaa
gttcagcgtaagccagctaaacctgttaaaccgtggagtgatgaagttcgtctaaaaggc
gaaaaagacacgcttggcctatatctcactggtcacccaattgatgtttaccgacaagaa
cttaaagcttttatccctgtgaaacttaatgaaattacggctacacgtcgtggtgttaca
acagtctatgcaggtttagtcattgacgtcgcaaacttcccaaatcgggtagttattgta
ctagatgacggtacagctcgtattgaagtaagttgcaaccatgaacgtttccaacgtttt
aaagatattattcaagttgaacgtgttgttgtctttgaaggcgaaatttatgaaagagaa
ggctttgaacgtccgatgggccgtttaactaaggcttttacattaaatgaaatacgacaa
aaacgtgctaacagtattcagatcaaattaacagaagagtttatgcaagccactttggca
aaagatttacaaaacataatcttgccattttgcaatgtagatatgcatcaacatatcact
ctacagctacagattgatcaaccttatgctcaagccgagcttcaacttggtccgcaatgg
aaagttgctcctctcgatgaattacttgctaaactcagagattattttggtaaagataat
atttacattgaatatcaagtaaagtcgaaagcagctaaagcagcagaacctactcgtccg
caaaccgttgcttcccctcccgcggacatgactatggacgatgcattggatttataccaa
agcgaagtttctcaatattcgtaa
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integrated database retrieval system
