Acinetobacter sp. Ac-14: IOD65_17845
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Entry
IOD65_17845 CDS
T11083
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acic Acinetobacter sp. Ac-14
Pathway
acic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IOD65_17845 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acic03019
]
IOD65_17845 (pnp)
03016 Transfer RNA biogenesis [BR:
acic03016
]
IOD65_17845 (pnp)
Enzymes [BR:
acic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IOD65_17845 (pnp)
Messenger RNA biogenesis [BR:
acic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IOD65_17845 (pnp)
Transfer RNA biogenesis [BR:
acic03016
]
Prokaryotic type
tRNA degradation factors
IOD65_17845 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_RRP5
S1_2
KH_N4BP1_2nd
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QOX00989
LinkDB
All DBs
Position
complement(3739684..3741771)
Genome browser
AA seq
695 aa
AA seq
DB search
MFNIVRKEFQFGQHQVVLETGRVARQANTVLITMGGVTVLVAVVAQPKAKAGQDFFPLTV
NYQEKQYAAGRIPGGYGKREGRASEAETLISRLIDRPIRPLFPEGYFNEIQVTATVVSSD
KTMDADIAAMLGTSAALSIAGTPFRGPIGGARVGLINGEYVLNPNFEQLKESDLDLVVAG
TESAVLMVESEAKELSEDQMLGAVLFGHDEMQIAIQAIKEFAAAAGAVESTWVAPTKNEA
LLEQLKAAFEAKISEAYTIAVKQDRYAALDALYAEAVAQFVPENDETGIADEVNELFEDL
KYRTVRDNILSGKPRIDGRDTKTVRAIDVQVGVLDRAHGSALFTRGETQALVTTTLGNTR
DALMVDTLAGTKTDNFMLHYNFPAYSVGETGRESGPKRREIGHGRLARRGVQAVLPAADR
FPYVIRIVSDITESNGSSSMASVCGASLSLMDAGVPLKAPVAGIAMGLVKEGERFAVLSD
ILGDEDHLGDMDFKVAGSANGITALQMDIKIEGITEEIMEVALNQAFAGRMHILNEMNKV
ISRARAEISAHAPTFEVININPDKIRDVIGKGGATIRQITEETKAAIDIEDNGTVRVFGE
TKAAAKAAIAKIQAITAEVEPGKIYDGKVIRIVEFGAFVNIMPGTDGLLHISQISNERIA
NVTDVLKEGQEVKVQVADVDNRGRIKLTMKDIEQA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatatcgttcgtaaagaattccaattcggtcaacatcaagtcgttttagaaacg
ggtcgcgttgcacgtcaagcaaacacagttttaatcactatgggtggcgtaactgtttta
gttgcagttgttgctcagcctaaagcaaaagcgggtcaagacttcttcccgttaacagtg
aactatcaagaaaaacaatatgcagctggtcgtatccctggtggttacggtaagcgtgaa
ggtcgtgcttctgaagctgaaactttaatttcacgtcttattgaccgtccaattcgtccg
ttgttcccagaaggttacttcaacgaaatccaagtaacagcaacagttgtttcttctgac
aaaactatggatgctgacattgcagcaatgcttggtacatcagcagcattatctattgct
ggtactcctttccgtggtccaattggtggtgcacgtgttggtttaatcaacggtgaatat
gttcttaacccgaacttcgaacagttgaaagaaagtgaccttgaccttgtggttgcaggt
acagaatctgctgtattgatggttgaatctgaagcgaaagaactttcagaagaccaaatg
cttggtgctgttcttttcggtcatgacgaaatgcaaatcgcaattcaagcgattaaagaa
tttgctgccgctgctggtgctgttgagtcaacttgggttgctccaactaaaaacgaagct
cttcttgagcaattaaaagcagctttcgaagcgaaaatctctgaagcatatacaattgcg
gttaaacaagatcgttatgcagcacttgatgcactttatgcagaagctgtagctcagttc
gttccagaaaatgacgaaactggtattgctgatgaagtaaacgaattattcgaagacctt
aaataccgtacagtacgtgacaacatcttgtcaggtaagccacgtatcgatggtcgtgat
actaaaactgttcgtgctatcgacgttcaagttggcgtattagatcgtgcacacggttct
gcattgtttacacgtggtgaaactcaggcgttggtaacaacaactttgggtaatactcgt
gatgcgttaatggttgatacccttgctggtactaaaactgacaacttcatgttgcactat
aacttccctgcatactctgtaggtgaaacaggccgtgaatctggtcctaagcgtcgtgaa
attggtcacggtcgtttagcacgtcgtggtgttcaagcagttcttcctgctgctgaccgc
ttcccgtatgtaattcgtattgtatctgacattactgaatctaacggttcatcttcaatg
gcttctgtatgtggtgcttcattatcacttatggatgcaggtgttccgcttaaagcacca
gttgctggtatcgcaatgggcttagtgaaagaaggcgagcgtttcgcagtactttctgac
atcttgggtgatgaagatcacttaggtgatatggactttaaagtagcaggttctgcaaac
ggtattactgcgcttcaaatggacatcaagattgaaggtattactgaagaaatcatggaa
gttgcattaaaccaagcatttgctggtcgtatgcacatcctaaacgaaatgaataaagtc
atttcacgtgctcgtgctgaaatcagtgctcatgcaccgacgtttgaagtgattaacatt
aacccagacaagatccgtgatgttattggtaaaggcggcgcaactatccgtcaaattact
gaagaaactaaagctgcaattgatatcgaagacaatggtacagttcgcgtatttggtgaa
actaaagctgctgctaaagctgcaattgctaagattcaagcaattactgctgaagttgaa
ccaggtaagatctatgacggtaaagtaatccgtatcgtagaattcggtgcgtttgtaaat
atcatgccgggtactgatggtcttcttcacatttcgcaaatttcaaatgaacgtattgcg
aacgtaactgatgttcttaaagaaggtcaggaagtgaaagtacaagttgctgatgttgat
aatcgtggtcgtatcaaattgactatgaaagacattgaacaagcataa
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