Acinetobacter sp. Ac-14: IOD65_17870
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Entry
IOD65_17870 CDS
T11083
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
acic Acinetobacter sp. Ac-14
Pathway
acic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IOD65_17870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acic03400
]
IOD65_17870
Enzymes [BR:
acic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IOD65_17870
DNA repair and recombination proteins [BR:
acic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IOD65_17870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF2793
Motif
Other DBs
NCBI-ProteinID:
QOW98955
LinkDB
All DBs
Position
complement(3750070..3753705)
Genome browser
AA seq
1211 aa
AA seq
DB search
MGIHVIQSQRIDVLLQGVLASTSQASTHPLQVLKTQHFIVPSPAVEQWLIQKLAEQQGMS
ANYQFHQRVRGFQWFAYQQVLTAHKEQVRKANIPRLIFKWRVHQALHEFIQPDTMSIDTS
HPLHSIVQRIYDSADRLEQGIDKQLKKQKMLYWVAEQVADLFSNYMIYRGQCQRGCENSC
TCPENWLSAWGQGRALDIEKYIVQKDEEVTAFALHQTEELERWQRWLWQQHFHDDFVQMQ
QIDALFWQELDHPDRSKRAISRLPNQVMIFTLLDLPPSQLQFLRRLGQYIDVLILHYNPS
QEYWADSVDPLWKQRYDLGVKERFIAKNPKATDAEISDFFNKFTLNFNAEARESRHPLLT
RLGKQARDHFSLLSNLSTGEEGKWVDAFVDDFPESLLGKVQSDILHLVEPQAKQYELASD
DDSIQIHVCHSTLRQLEVLKEQLICWLAKPHEQPRRPNDILVLVPNLADIEPLIRSVFPA
TATEQGVHLPVKIAGVASLDALNAWRAVIGRIQLMQGRFSFDDFADWLSLHATQQRYELE
YVQVERILNLLADAGFKRGLDAEHLKRSLCDGDDDYRYSFKFALERLALGIAVPVHATFN
QVLSYAKVQPSDFELVGTLIQIYQDLNERRDWLTLHEQGKVYTVEYWLQVLGKDIVEFEQ
VGVAALKAVREIVKKQERMLTLASYYAETETGTLRKITLPLPYIIEEIQRTLESQSAQAE
PTGQITFAQIGHIRPLPYRLMVMLNLDAGQFPNRDTHVPFDLMDALRQQLGDRSRLEDDQ
GAFLDALLLAQDNLWLFYNGFDVNDGEVREPSSILQEFREHLALIVKAEDSEPENIVVEG
IEIPSQLKQLYHLHDLQPFDPKGFTLEKSVTRYQDHWFKVASQIQQVSGSRQPWANTTYP
LQIPDILVLESQQWIQDVTFPARLYLKTLGVENLGSVGVLDQNEPLLLDGLGRYAIRHFL
QQSEQQAQPEVLIDQLPVGKVKYSAWQQGVFEQECLLERLHHYAPAVTQTTQRIWRIAKQ
LHMNITVPKSETRDWVSMEPSSARAKRRAKVWLEYLLWLAYLNEGSAGAEKRRIVVFSDQ
TVICSGISSEQARQYLQPWFKIWRHAQQQPLVLPAALLLKPLEKAKAYQWETTNQTEKAK
LDEKSYAELLKYWNETGSFTTMDMTQNEACKLHQDWSFILQEQDAQALLQHACDEFAYDL
YHPVFQFQHSE
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggggatccatgttattcaaagtcaacgtattgatgtgttgttgcaaggtgtattggcg
tctacatctcaagcttcaacgcatccattacaggttttgaaaacccaacattttattgtt
ccaagtcctgcggtcgagcagtggctgatacaaaaacttgcagaacaacaaggcatgagt
gccaattaccagtttcaccaacgggtacgaggtttccaatggtttgcctatcagcaagtt
ttaactgcgcataaagaacaggtccgtaaagcgaacatcccgcgtttgatttttaaatgg
cgggtgcatcaggctctacacgaatttattcaacctgacacgatgagcatcgatacgtcg
catcctttacattctattgttcagcgtatttatgacagtgcagatcgactcgaacaaggc
atagataaacaattaaaaaaacaaaaaatgctgtattgggtcgctgagcaggttgccgat
ctatttagcaactatatgatttatcgtggacagtgccagcgtggttgtgaaaatagttgt
acctgtccggaaaactggttgtctgcttggggacagggccgagcactcgatattgaaaaa
tatattgtgcagaaagatgaagaagtgactgcttttgcattacatcaaactgaggagcta
gagcgttggcagcgttggttgtggcagcaacattttcatgatgattttgtgcaaatgcag
caaattgatgcattgttttggcaagagttagatcatccggaccgcagtaagcgtgctatt
tcaagattacctaatcaggtgatgatctttacgttattagatttgccgccaagccagtta
cagttcttgcgccgtttaggccaatacattgatgtactgattttgcactataacccttca
caagaatattgggccgatagtgtcgatccactctggaaacagcgttatgacttaggggta
aaagagcgttttattgcgaaaaatccaaaggctactgatgctgaaattagtgatttcttt
aataaatttacactcaactttaatgctgaagcgcgtgagtccagacatccgcttttaacc
cgattgggtaaacaagcccgcgatcacttttctttattatcgaatttatctacaggtgaa
gaaggtaagtgggttgatgcttttgtggatgattttcctgaaagtctgcttggtaaagtt
cagtcagatattttacatttggtagaaccgcaagcgaaacaatatgagcttgcttccgat
gatgactctattcagattcatgtttgtcattcgactctacgtcaacttgaagtattaaaa
gagcaattaatctgttggttggctaaaccgcatgaacagccgcgccgtccaaacgatatt
ttagttctagttcctaatttggccgacatagagcctttaattcgaagtgtatttcctgct
actgccactgagcagggtgtgcatttgccagtaaagattgcaggtgttgcatcacttgat
gcacttaatgcttggcgtgcagtaattgggcgtattcaactgatgcagggccgttttagt
tttgatgattttgctgattggttaagcttgcatgcgacccagcaacgttacgaacttgag
tatgttcaggttgagcggattttaaatttgcttgctgatgcgggctttaaacgagggctt
gatgcagagcatctcaagcgcagtttgtgtgacggtgatgatgattatcgatatagcttt
aaatttgccttagagcgattggctctcggcattgccgtgcctgtacatgcgacgtttaat
caggtgttgagttatgccaaagttcaaccgagcgatttcgagttggtgggtacactcatt
cagatttatcaggatttgaacgagcgccgtgattggctgactctgcatgaacaaggaaaa
gtctatacggttgaatattggcttcaggtactaggcaaagatattgttgaatttgagcag
gttggtgttgctgctctaaaagctgtgcgtgaaattgttaaaaaacaagaacgaatgttg
acgctcgcaagctattacgccgagacagaaacaggaactttgcgcaaaattaccttgcct
ctgccttatattattgaagaaattcaacggacattagaaagccaaagtgcacaagctgaa
ccgacagggcaaattacctttgcccaaattggacacattcgaccgttaccttatcgttta
atggtcatgctaaatcttgatgcaggacaatttccaaaccgcgatacccatgttccattt
gatttgatggatgcactgcgtcaacagttaggcgatcgctctcgacttgaagatgatcaa
ggtgcttttttagatgctttattattagcccaagataatttatggctgttttataacggc
tttgatgtgaacgatggcgaggtacgcgaaccttccagtattcttcaagagttccgtgaa
catcttgccttgattgtgaaagctgaagatagtgaacctgaaaatatagttgttgaaggg
attgaaattccatcacagttaaagcaactctatcacttacatgatttacagccctttgat
ccgaaaggttttactctagaaaaaagtgttacccgttatcaagatcactggtttaaggtc
gcttcacaaattcagcaagtttcaggaagtcgccaaccttgggcgaatacgacctatccg
ctacaaatacctgacatactggttttagaaagccagcagtggatacaggatgtgacattc
cctgcacgattatatttgaaaactttaggggtagaaaacttaggaagcgtcggagtactc
gaccaaaatgaacctttattattagatggtttagggcgctatgcgattcgacatttttta
caacaatctgaacagcaagcacaacctgaagtattaattgatcagttgcctgtcggtaaa
gtcaaatatagcgcatggcaacaaggtgtttttgagcaagaatgtttacttgaacgcctt
caccattatgcaccagcagtgacacaaacaactcagcgtatttggcgaattgctaaacag
cttcatatgaatattacggttccgaagtctgaaactcgggactgggtgagtatggaacct
tcaagcgctcgcgcaaaaagacgtgctaaagtctggttagaatatctgctctggttagct
tatttgaatgagggtagtgcaggagctgaaaagcgccgtattgtggtttttagcgatcaa
actgtgatttgtagtgggattagttctgagcaagctcggcaatatttacaaccatggttt
aaaatctggcgccatgcacagcaacaaccattggttttaccagcagccttattattaaag
ccattagaaaaagctaaagcatatcagtgggaaacaacaaatcagacagaaaaagcaaaa
ctggatgagaagagctatgctgagctgctaaaatactggaatgaaacagggtcatttacc
acgatggatatgactcaaaatgaagcttgtaagttgcatcaagactggagctttattttg
caagaacaagatgcgcaagctttgcttcaacatgcttgtgatgagtttgcgtatgatttg
tatcatccggtttttcaatttcaacattcggagtaa
DBGET
integrated database retrieval system
