Acidovorax carolinensis NA2: CBP33_01650
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Entry
CBP33_01650 CDS
T04914
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acid
Acidovorax carolinensis NA2
Pathway
acid03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acid00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CBP33_01650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acid03021
]
CBP33_01650
03400 DNA repair and recombination proteins [BR:
acid03400
]
CBP33_01650
Enzymes [BR:
acid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CBP33_01650
Transcription machinery [BR:
acid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CBP33_01650
DNA repair and recombination proteins [BR:
acid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CBP33_01650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ART46987
LinkDB
All DBs
Position
330447..334673
Genome browser
AA seq
1408 aa
AA seq
DB search
MKSLLDLFKQFTPDEHFDAIRIGMASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMSEDDYDAKRKEYGDEFIAKM
GAEGIKDLLESIDIDLSIERLRGDLTGSEVKVKKNAKRLKVLEAFKKSGIKPEWMVLEVL
PVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEA
VDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPTLK
LHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVESGTPVVWDILEEVIKEHPVM
LNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQMEART
LMLASNNVLFPASGEPSIVPSQDVVLGLYYATRDRINGKGEGLVFADTGEVQRALDAGEV
ELAAKITVRMTEWTKNKETGEFVPSTSLVETTAGRALLSEILPKGLPFANMNKALKKKEI
SKLINVSFRKCGLKETVVFADKLLQNGFRLATRAGISIAIDDMLVPPQKAGIIERSEKEV
KEIEQQYVSGLVTSGERYNKVVDIWGKAGDEVSKVMMAQLSKQKVMDRHGKEVDQESFNS
IYMMADSGARGSAAQIRQVAGMRGLMAKPDGSIIETPITANFREGLNVLEYFISTHGARK
GLADTALKTANSGYLTRRLVDVTQDLVVTEEDCGTGNGSLMRAIVEGGEVIESLRERILG
RTAAEDVLHPENRSVLVQAGVMLDEDLIEELEAAGVDEVKVRTALTCETRYGLCAKCYGR
DLGRGGLINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAIASSVEAKSNGVIGFN
ATMRYVSNTKGELVVIARSGEIIIHDEHGRERERHKVPYGATLTVKADQQIKAGTILANW
DPLTRPIITEFAGQTKFENVEEGLTVAKQVDEVTGLSTLVVIDPKRRGAAKVVRPQVKLI
DAQGNEVKIPGTDHSVTIGFQVGALIQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRV
AELFEARTPKDKGTLAEMTGTVSFGKETKGKVRLQITDPEGHVFEELVPKEKNILVHEGQ
VVNKGESIVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLR
RVVVENIGESSYIGGEQVERSEILNTNDALQAAGKIPATYSNLLLGITKASLSTDSFISA
ASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGMAYHQARKAKDAMDDAERRA
IAEAEAAEMEASAEAPVTEGAAPDAAAD
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgctactcgacctgttcaagcaattcacgccggatgagcacttcgatgccatc
cgcatcggcatggcatcgcccgaaaagatccgttcgtggtctttcggtgaggtgaagaag
cccgaaacgatcaactaccgcacgttcaagcctgagcgcgacggcctgttctgcgccaag
atctttggtcccatcaaggactatgaatgcctgtgcggcaagtacaagcgcctcaagcac
cgcggcgtgatctgcgagaagtgcggcgtggaagtcacgcagaccaaggtgcgtcgcgaa
cgcatgggtcacatcgacctggccgcgccctgcgcgcacatctggttcctgaagtcgctg
ccatcgcgtctgggcctggtgctcgacatgacgctgcgcgatatcgaacgcgtgctgtac
ttcgaagcctatgtggtgaccgaccccggcatgaccccgctgaagaagttcagcatcatg
tccgaggacgactacgacgccaagcgcaaggaatacggtgacgagttcatcgccaagatg
ggcgccgaaggcatcaaggacctgctggaatccatcgacatcgacctgtcgatcgagcgc
ctgcgcggcgacctgaccggctccgaagttaaggtcaagaagaacgccaagcgcctgaag
gtgctcgaagcgttcaagaagtcgggcatcaagcccgagtggatggtgctggaagtactg
cccgtgctgcccccggacctgcgtccgctggtgccgctggacggtggccgcttcgcgacc
tccgacctgaacgacctgtaccgccgcgtcatcaaccgcaactcgcgtctgcgccgtttg
ctggaactgaaggcccctgaaatcatcgctcgcaacgaaaagcgcatgctgcaggaagcc
gtcgactcgctgctggacaacggccgccgtggcaaggccatgacgggcgccaacaagcgt
gccctgaagtcgctggccgacatgatcaagggtaaatcgggccgcttccgccagaacttg
ctgggcaagcgcgtggactactccggtcgttccgtgatcaccgtgggcccaacgctcaag
ctgcaccagtgcggcctgcccaagctgatggcgctggagctgttcaagccgttcatcttc
tcgcgcctcgaagccatgggcatcgccaccaccatcaaggcggccaagaaggaagtcgaa
tccggcacccccgtggtgtgggacatcttggaagaggtcatcaaagagcaccccgtgatg
ctgaaccgtgcgcctacgctgcaccgtttgggtatccaggcctttgagcccatcctgatc
gaaggcaaggccatccagctgcaccccctcgtttgcgcggcgttcaacgccgacttcgac
ggtgaccagatggctgtccacgtcccgctgtcggtggaagcgcagatggaagcccgcacg
ctgatgctggcctccaacaacgtgctgttccccgcgtcgggcgagccttccatcgttcct
tcgcaggacgtggtgctgggcctgtactacgccacccgtgaccgtatcaacggcaagggt
gaaggcctggtgttcgccgataccggtgaagtgcagcgtgctctggatgccggcgaagtg
gagctggcagccaagatcaccgtgcgcatgaccgagtggaccaagaacaaggaaaccggc
gaattcgtgccatcgacatcgctggtggagacgaccgcgggccgcgcgctgttgtctgaa
atccttcccaagggcctgccgttcgccaacatgaacaaggcgctcaagaagaaggaaatc
tccaagctcatcaacgtgagcttccgcaagtgcggtctgaaagaaactgtggtcttcgcc
gacaagctgttgcaaaacggcttccgcctggctacgcgcgccggtatctcgattgccatc
gacgacatgctggtgccgccgcaaaaggccggcatcatcgagcgctcggagaaggaagtc
aaagagatcgaacagcaatacgtgtccggtctggtcacctctggcgagcgctacaacaag
gtggtggacatctggggcaaggccggcgacgaagtgtcgaaggtgatgatggcccagctg
tccaagcagaaggtcatggaccgccacggcaaggaagtggaccaggagtccttcaactcc
atctacatgatggccgactcgggtgcccgcggttctgctgcccagatccgacaggtggcc
ggtatgcggggtctgatggccaagccggatggctcgatcatcgaaacacccatcaccgcg
aacttccgcgaaggcctgaacgtgctggagtacttcatctccacccacggtgctcgcaag
ggtctggctgacacggcgctgaagacggcgaactcgggttacctgacccgccgtctggtg
gacgtgacgcaggatctggtcgtgaccgaagaggattgcggcactggcaatggttcgctg
atgcgcgccatcgtcgaaggcggcgaagtgatcgaatcgctgcgcgaacgtatcctgggc
cgcacggctgcagaagacgtgctgcaccccgagaaccgctcggtgctggtccaggcgggc
gtcatgcttgacgaagacctcattgaagagctcgaagcggccggcgtggacgaagtgaag
gtgcgtacggccctgacctgcgaaacccgctacggcctgtgcgccaagtgctatggccgc
gatttgggccgtggcggcctgatcaacctcggcgaagccgtgggtgtgattgctgcccag
tccatcggtgaacccggcacgcagctgaccatgcgcacgttccacatcggtggtgccgca
tcgcgcgctgccatcgcatcgagcgtggaagccaagtccaacggcgtgatcggcttcaac
gccacgatgcgctacgtgagcaacaccaagggtgagctggtggtgattgcgcgttcgggt
gaaatcatcatccacgacgagcatggccgcgagcgcgaacgccacaaggtgccttacggc
gccacgctgacggtcaaggccgaccagcaaatcaaggctggcaccatcctcgccaactgg
gatccgctgacgcgccccatcatcaccgagttcgccggtcagaccaagttcgagaacgtc
gaagaaggcctgacggtggccaagcaggtcgacgaagtgaccggtctgtccacgctggtg
gtgattgatccgaagcgccgtggtgccgccaaggtcgtgcgcccgcaggtgaagctgatc
gatgcgcaaggcaacgaagtgaagatccccggcaccgaccactcggtgaccatcggcttc
caggtcggcgcgctgatccaggtgcgcgacggccaggacgtgggccccggcgaagtgctg
gcgcgtattccggtcgaaggccagaagacccgcgacattaccggcggtctgccccgcgtg
gccgagctgtttgaagcccgcacgcccaaggacaagggcacgctggccgagatgaccggc
accgtgtcgttcggcaaggaaaccaagggcaaggtccgcctgcagatcaccgatcccgaa
ggccatgtgttcgaagaactcgtgcccaaggaaaagaacatcctggtgcacgaaggccag
gtggtgaacaagggcgaatcgattgtggacggcccggccgacccgcaagacatcctgcgc
ctgctgggcatcgaagaactgtcgcgctacatcgtcgacgaggtgcaggacgtgtaccgc
ttgcagggtgtgaagatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcgc
cgcgtggtggtcgagaacatcggcgagtccagctacattggtggcgagcaggtcgagcgc
tccgagatcctcaacaccaacgatgcactgcaggccgcgggcaagatccctgcgacctac
agcaatctgctcttgggtattacgaaggcatcgctgtcgaccgactcgttcatctcggcg
gcgtccttccaggaaacgacccgcgtgctcaccgaggcggccatcatgggcaagcgcgac
gagttgcgtggtctgaaggaaaacgtgatcgtggggcgtctgattcctgccggcaccggc
atggcgtaccaccaggcgcgcaaggccaaggacgccatggacgacgccgagcgccgcgcc
attgccgaagcggaagccgctgaaatggaagcctccgcagaagctcccgtgacggaaggc
gctgcacccgacgcagctgccgattaa
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integrated database retrieval system
