Acidovorax carolinensis NA2: CBP33_08830
Help
Entry
CBP33_08830 CDS
T04914
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
acid
Acidovorax carolinensis NA2
Brite
KEGG Orthology (KO) [BR:
acid00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CBP33_08830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
HHH_6
DUF460
T2SSK
Spt6_S1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-ProteinID:
ART48214
LinkDB
All DBs
Position
1848181..1850550
Genome browser
AA seq
789 aa
AA seq
DB search
MQKIVRQIAEEIRITEQQVKAAVELLDGGATVPFIARYRKEVTNGLDDIQLRELEARLSY
LRELEDRRAAVLKSIDEQGKLTDALRVAIAAAPTKQELEDIYLPFKQKRRTKGQMAREFG
IEPLADKLFADPTLDPAVEAAAFTRPPEVLDDGKPGADFSTVPAVLDGVRDILSERWAED
AVLVQSLREWLWAEGLLRSKKVDGKNENDPEVSKFRDYFEYDEPIGRVPSHRALAVFRGR
GLEILEAKLVLPIEPEPGKPSMAEGKIALHLGWSHAGRPADDLIRKCVAWTWRVKLSLST
ERDLFARLRDDAEKVAIKVFADNLRDLLLAAPAGPRVVMGLDPGIRTGVKVAVVDATGKL
VETATVYPHEPRRDWEGSLHTLAKLAEKHGVNLIAIGNGTASRETDKLAADLIKLAAKVD
RVIEKVVVSEAGASVYSASEYASQEMPDVDVSLRGAASIARRLQDPLAELVKIDPKSIGV
GQYQHDVNQSELARTLGTVVEDCVNSVGVDLNTASVPLLSRVSGLSGSVAKAVVRWREAN
GAFKSRKQLMDVAGLGAKTFEQSAGFLRIRGGENPLDMTGVHPETYPVVEQIMEKTGKPV
AELMGRADMLKTLKPELFANEKFGVITVKDILAELEKPGRDPRPDFKVARFNDGVDDIKD
LKEGMILEGTVSNVAQFGAFVDLGVHQDGLVHVSQLAHKFVNDAREVVKTGDIVKVKVME
VDVERKRIGLSMKLGDAPARQSGDRGAPRDNRFEGAGRGYAQPQRRAPEPAAQSAMASAF
AKLQQTKNR
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagatcgtccggcagattgccgaagaaatccggatcaccgagcaacaggtcaag
gccgccgttgagttgctggatggtggtgccaccgtgcccttcatcgcacgctaccgcaag
gaagtgaccaacgggctcgacgatatccagctgcgtgagctggaagcgcgcctttcatac
ctgcgcgagctcgaagaccgccgtgcggccgtgctcaaaagcattgacgagcagggcaag
ctgaccgacgcattgcgcgtggcgattgccgccgcgccgaccaagcaggaacttgaagac
atttacctgcccttcaagcaaaagcgccgcaccaagggccagatggcccgcgaattcggt
attgagccgctggccgacaagctttttgccgaccccacgctcgaccctgctgtcgaggcc
gcagcctttaccaggccgcccgaagtgctggacgatggcaagccgggcgccgacttttcc
accgtgcctgccgtgctcgacggtgtgcgcgacattttgtcggagcgctgggcggaagac
gccgtgctggtgcaatccttgcgcgaatggctgtgggctgagggcctgctgcgcagcaaa
aaggtggacggaaagaacgagaacgaccccgaggtttccaagttccgcgactactttgaa
tacgacgagcccattggccgcgtgccctcgcaccgtgcactggccgtattccgggggcgt
gggctggagatcctggaagccaagttggtacttcccatcgaacccgaacccggcaagccc
agcatggccgagggcaagattgccctgcacctgggctggagccacgcgggccgccccgcc
gacgacctgatccgaaaatgcgtcgcctggacctggcgcgtgaagctgagtctttcgacc
gaacgcgacctgttcgcccgcctgcgcgacgacgcagaaaaagtggcgatcaaggtgttt
gccgacaacctgcgcgacctgttgctggccgcacccgccggcccgcgcgtggtgatgggg
ctggaccctggcatccgcaccggtgtgaaggtggccgtggtcgatgccacgggcaagctg
gtggaaaccgccaccgtgtatccgcacgagccacgccgcgactgggaaggctcgctgcac
accctggccaagctggctgaaaaacacggcgtgaacctgattgcgattggcaacggcacc
gccagccgcgagaccgacaagctggcggccgacctgatcaagctggccgccaaggtggac
cgtgtgattgaaaaggtggtggtcagcgaggctggcgcgtccgtttacagcgccagcgaa
tacgcgtcgcaggagatgcccgacgtggacgtgagcctgcgcggcgccgccagcattgcg
cgccgcctgcaagacccgctggccgagctggtgaagatcgatcccaagagcatcggtgtg
ggccagtaccagcatgacgtgaaccagagcgagctggcgcgcacgctgggcacggtggtg
gaagactgcgtgaactcggtgggcgtggacctgaacacggccagcgtgccgttgctcagc
cgcgtgtcgggactgtcgggcagtgtggcgaaggccgtggtgcgttggcgcgaggccaat
ggcgcattcaagagccgcaagcagctcatggacgtggcgggcctgggcgccaagacgttc
gagcaaagcgcaggctttttgcgcatccgcggcggcgagaacccgctcgacatgaccggc
gtgcacccggagacctaccccgtggtcgagcagatcatggaaaagaccggcaaacctgtg
gccgagctgatgggccgcgccgacatgctcaagacgctcaagcccgagctgttcgccaac
gagaagtttggcgtgatcaccgtcaaggacatcctggccgagctggaaaagcccggccgc
gacccgcgcccggacttcaaggtggcgcgcttcaacgacggcgtggacgacatcaaggat
ttgaaggaaggcatgatcctggagggcacggtgagcaacgtggcgcagtttggtgctttc
gtcgacctcggggtgcaccaggacggcctggtgcatgtaagccagctggcgcacaagttc
gtgaacgatgcgcgcgaagtggtcaagaccggtgacatcgtcaaggtcaaggtcatggag
gtggacgtagagcgcaagcgcatcgggctgtcgatgaagctgggcgatgcgcctgcgcgc
cagagcggcgaccggggcgcgccgcgcgacaaccggtttgagggggcaggccgcgggtat
gcgcaaccgcagcgccgcgcgcccgaacctgcggcgcagtcggccatggcctcggccttc
gccaagttgcagcaaaccaagaatcggtaa
DBGET
integrated database retrieval system
