Acidovorax carolinensis NA2: CBP33_09200
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Entry
CBP33_09200 CDS
T04914
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
acid
Acidovorax carolinensis NA2
Pathway
acid03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CBP33_09200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acid03400
]
CBP33_09200
Enzymes [BR:
acid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
CBP33_09200
DNA repair and recombination proteins [BR:
acid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CBP33_09200
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CBP33_09200
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CBP33_09200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ART48280
LinkDB
All DBs
Position
1937937..1939382
Genome browser
AA seq
481 aa
AA seq
DB search
MAPHTFLWHDYETFGANTRRDRPAQFAAIRTDAALNEIGDPLMLYCQPANDYLPDPQSCL
ITGITPQLCLEKGVPEHAFASRIEAEFAQPGTIGVGYNTIRFDDEITRFMFWRNLIDPYA
REWQNQCGRWDLLDVVRMTYALRPDGITWPKKEDGTPSFKLEHLSKANGLLHETAHDALS
DVRATIALARLIRQHNPKLFDFALSLHKKDRVAAELRLPATALTARPFLHVSGMFPADRG
CLAVMWPLASHPTNKNELIAWDLAHNPRELATLGADEIRLRMFSRAADLPEGTTRLPIKT
IHLNKSPMVVGNVNTLTPALAQRWGIDLAQAAQHADMARALPDMSGIWPAVFACPAEPAP
DVDQDLYGGFVGNSDRRHLNDLRTLSGAKLATARTGFDDPRLAELVWRYRARNFPDTLSP
EEADRWEAHRAACLFEGAGGARTVEQLFTEIDQISETADDDRTQEILGALYDYAEHIAPE
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcccctcacacctttctctggcacgactacgaaaccttcggtgccaacacccggcgc
gaccggccggcgcagtttgcggccatccgcaccgacgccgcgctgaacgaaatcggcgat
ccgctgatgctttattgccagcccgccaacgactatctgcccgatccgcagtcttgcctg
attaccggcatcacgccgcagctgtgcctcgaaaagggcgtgcccgagcacgcttttgcc
agccgcatcgaggccgaatttgcgcagccgggcaccattggcgtgggctacaacaccatc
cggtttgacgacgagatcacgcgcttcatgttctggcgcaacctcatcgacccctacgcg
cgcgagtggcaaaaccagtgtggtcgctgggatctgctcgatgtggtgcgcatgacctat
gcgctgcggccggacggcatcacctggcccaaaaaggaagacggcacgcccagcttcaag
ctggaacatctctccaaggccaacggcctgctgcacgagaccgcgcacgatgcgctgtcg
gacgtgcgcgccaccattgcgctggcgcggctgatccgccagcacaaccccaagctgttt
gactttgccctgtcgctgcacaaaaaggaccgcgtggccgccgaattgcgcctgccggca
acggccctcacggcgcggccgtttttgcatgtgtcgggcatgtttccggccgaccgtggt
tgccttgcggtgatgtggccgctggccagccatcccaccaacaagaacgagctgattgcc
tgggacctcgcccacaacccgcgcgaactggccacgctgggcgccgacgagatccgcctg
cgcatgttctccagggcggccgacctgcccgagggcaccacgcgcctgcccatcaagacc
atccacctgaacaaatcgccgatggtggtgggcaacgtgaacacgctcacgccagcgctg
gcgcagcgctggggcatcgacctggcccaggcggcgcagcatgccgacatggcgcgggcc
ttgcccgacatgagcggcatctggcccgccgtgtttgcctgcccggccgagcctgcgccc
gacgtggaccaggacctgtatggcggattcgtgggcaacagcgaccgccgccacctgaac
gacctgcgcaccctgtcaggggcgaagctggccaccgcgcgcacgggttttgatgacccg
cgcctggccgaactggtgtggcgctaccgggcccgcaacttcccggacacgctgtcgccc
gaagaggccgatcgctgggaggcgcaccgcgccgcctgtctgtttgaaggggcgggcggg
gcgcgcaccgtggagcagctgttcaccgagatcgaccagatctcggaaaccgctgacgac
gaccgcacccaggagattctgggcgccctgtacgattacgctgagcacatcgcacctgaa
cggtag
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