Acidovorax carolinensis NA2: CBP33_11310
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Entry
CBP33_11310 CDS
T04914
Name
(GenBank) helicase SNF2
Organism
acid
Acidovorax carolinensis NA2
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
DEAD_2
HDA2-3
Motif
Other DBs
NCBI-ProteinID:
ART48643
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All DBs
Position
complement(2413285..2416635)
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AA seq
1116 aa
AA seq
DB search
MDLYCRADVVDVDIEPDGDGRWRIEGEVQGSLPAPYQVSAQLALAPNGQVTQWSGECSCP
VGAGCKHAVALTLQAAHQKPAQNQTAAQTFDAIQALQERKQAMARAEADARLVHWLQDWD
RAVGGSAAPAPGARPDRPERYLYLVSTVGLPRATTPQMQLEAVVSYPKVTGGWAKPKPIR
TQPGPGQAVYDSASDADRQVLQLLRAMPRGLGYYSAYSSAPVAVLEGTVGVMALQQAAST
GHLFADVGGSTVGAPLRWGDPLSITWTWREATPAAGGESTWALCASLPAASATLCSNSPP
LYLDAAHGVCGQVVADGLGAAQLAILLRAPALSAAALQKHHAEVARRLGAVLPLPPVLGP
LTQVQGVQPVARLHLAPVPVGDVPDLGLITAQLRFDYRGHAGWWAGQELDVLVAAADGSQ
VLLQRDARAELDAIERLMDLGLLATDDGLFGIPGERPQNDWMHWADNGFGVLRDAGFELT
LDAALGGWITHADALAVALQPEGDDEATSPWFALSLGMEVNGVRHNILPWLPDLIAAAAS
QPVDPATGLPQLPSHVYLPSQVGPGFVRLPTDTLRPWMAVLLDLVGDRAHDFNGDSLKLS
RLDALRTSAALGEGAVWEGAGALRAMVEQLKGANSLSEVPLPAGVRATLRPYQQQGLNWL
QFLSAHGLAGVLADDMGLGKTLQTLAHIQVEKDAGRLTRPALIIAPVSLMGNWQREAARF
CPGLRSLVLHGAGRHEVAESVDEHDLVIAPYSLLQRDRERWLAHEWHLVVLDEAQNIKNA
STHAAQVVSQLQARHRLCLSGTPMENHLGEVWSLFHFLMPGFLGSQQRFKEVFRTPIEKL
GDSTRMAQLRARITPFMLRRTKALVASELPPKVETVMPVEMTGAQADLYETIRLGMEKTV
REALQSKGLAKSQITILDALLKLRQVCCHPQLVPLDAAKKVKTSAKLDQLMALLPEMLAE
GRRILLFSQFTSMLTLIEAELKKRNLPWVKLTGQSQRRDAIIEQFTSGQVPLFLISLKAG
GVGLNLPQADTVIHYDPWWNPAVENQATDRAHRIGQTQSVWVIKLVAQGTIEERILALQE
RKAQLASSLYSDAAGRKEPLFTESDLAELLQPLSLS
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtattgcagggcggacgtggtcgacgtcgacatcgaaccggacggtgatggc
cgctggcggatcgaaggcgaggtgcagggcagcctgccagcgccctatcaggtgtcggcg
caattggctcttgcaccgaatggccaggtgacgcaatggtcgggcgaatgcagttgccct
gtgggcgcaggttgcaagcacgccgtggcgttgaccctgcaggctgctcaccagaagccg
gcccaaaatcagaccgctgcccaaaccttcgatgccatccaagcactgcaggagcgcaag
caagccatggcgcgcgccgaggccgacgcgcggctggtgcactggctgcaggactgggac
cgtgctgtgggcggctcggccgcgccagctccgggcgcccgtccggatcggccagaacgc
tatctttacctggtctccaccgtggggctgccacgcgccaccacgccgcagatgcagctg
gaggccgtggtgtcctaccccaaagtcaccggcggctgggccaagcccaaaccgatccgc
acgcagccgggtccagggcaggccgtgtatgacagcgcgagcgacgccgaccgccaggtg
ctgcaactgctgcgtgccatgccgcgtggcctgggttattactcggcctacagcagtgcc
ccggtggcggtgttggaaggcacggtgggtgtgatggcgctgcagcaggcagccagcacc
ggccacctgtttgccgatgtgggcggctccaccgtcggtgccccgcttcgctggggtgac
cccctatccatcacctggacatggcgtgaggccacgcccgctgccgggggtgaaagcacc
tgggcgctgtgcgccagcctgcctgctgcgtcagccacgctgtgcagcaacagcccgccc
ttgtatctggatgccgcccacggcgtgtgtggccaggtggtggccgatggcctgggtgct
gcgcagctggctatcttgctcagggcgcccgcgctgagtgccgccgcgctgcaaaagcac
cacgccgaggtggcccgccggctgggcgcggtgctgccattgccgccggtgctcgggcca
ctcacgcaggtgcagggcgtccaaccggtggcacgcctgcatctggcgcccgtgcctgtt
ggcgatgtgcccgacctgggcctcatcaccgcccagctgcggttcgactaccggggccat
gcaggctggtgggccgggcaggagctggacgtgctggtggctgcggcggatggcagccag
gtactgctgcagcgcgatgcgagggccgagctcgatgccatcgagcggctgatggacctg
ggcctgctggccaccgacgacggcctgttcggcatccctggtgagcgcccgcaaaacgac
tggatgcactgggccgacaacggttttggggtgctgcgcgacgcggggtttgaacttacg
ctggatgccgcgctgggtggttggatcacgcatgctgacgcactggccgtggcactgcag
cccgagggcgatgacgaagccacttcgccctggtttgcgctgtcgctgggcatggaggtc
aacggcgtgcgccacaacatcctgccctggctgcccgacctgattgccgccgctgcttct
cagccggtggacccagccacgggcctgccgcagctgccatcgcatgtctatctgccttcg
caagtgggcccaggttttgtgcgcctgcccactgacacgctgcgcccctggatggcggtg
ctactggaccttgtgggcgaccgtgcccatgatttcaacggcgacagcctgaagctctcg
cgcttggacgccctgcgcaccagcgccgcgctgggcgaaggagccgtgtgggagggcgct
ggcgccttgcgcgccatggtggagcagctcaagggggccaattcgttgtccgaagtgccg
ctgcccgctggcgtgcgggccacgctgcggccctaccagcagcagggcctgaactggctg
cagtttctgagcgcccacggcctggctggtgtgctggccgacgacatgggcctgggcaaa
acgctgcagaccctggcccatatccaggtcgaaaaagacgcgggccgcctgacccggccc
gcgctcatcattgcccccgtgagcctgatgggcaactggcagcgcgaggccgcgcgcttt
tgtccgggcctgcgcagcctggtgctgcacggagcgggccgccatgaggtggccgaatcg
gtggacgagcacgatctggtcattgccccgtattcgctgctgcagcgcgaccgcgaacgc
tggctggcgcacgaatggcacctggtggtgctcgacgaggcccagaacatcaagaacgcc
agcacccacgccgcgcaggtggtgagccagttgcaggcgcgccaccgcttgtgcctgtcg
ggcacgcccatggaaaaccacctgggcgaggtgtggagcctgtttcacttcttgatgccc
ggctttctgggcagccagcagcgcttcaaggaggtgtttcgcacaccgattgaaaagctg
ggcgacagcacgcgcatggcgcagttgcgcgcgcgcatcacgcccttcatgctgcggcgc
accaaggcgctggtggccagcgagctgccgcccaaggtcgaaaccgtgatgcccgtggag
atgaccggtgcgcaggcggacctgtacgaaaccattcgcctgggcatggaaaaaaccgtg
cgcgaggcgctgcagtccaaggggctggccaaatcgcagatcaccatcctcgatgcactg
ctcaagctgcgccaggtctgctgtcacccgcagctggtgccgctcgatgccgcaaagaag
gtcaagacctcggccaagctcgaccagctcatggccctgttacccgaaatgctggctgag
ggacggcgcattttgctgttctcgcagttcaccagcatgcttacgctgatcgaggccgag
ctgaaaaagcgcaacctgccctgggtcaagctcacggggcagagccagcggcgcgacgcg
atcatcgagcagttcaccagcgggcaggtgccgctgttcctcattagtctgaaggcgggt
ggcgtggggctcaacctgccgcaggccgatacggtgatccattacgacccctggtggaac
ccggcggtggaaaaccaggcaacggatcgcgcccaccgcattggccagacacagagcgtt
tgggtgatcaagctggtggcgcagggcaccattgaagagcgcatcctggcgctgcaagag
cgcaaggcgcagctggcgagcagcctctacagcgacgctgccgggcgcaaggagccgtta
tttaccgaaagcgacttggcggagctgttgcaaccgctatcactgtcgtag
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