Acidovorax carolinensis NA2: CBP33_11340
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Entry
CBP33_11340 CDS
T04914
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
acid
Acidovorax carolinensis NA2
Brite
KEGG Orthology (KO) [BR:
acid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acid03016
]
CBP33_11340
Enzymes [BR:
acid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CBP33_11340
Transfer RNA biogenesis [BR:
acid03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CBP33_11340
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ART48647
UniProt:
A0A240U3Y2
LinkDB
All DBs
Position
complement(2422303..2423775)
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AA seq
490 aa
AA seq
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MDKQHTFHRSDLVRIAIDAMKERGLEPEFPPRALQQLQTIGAAGQDDDPRIRDLTALPWC
SIDNDDSLDLDQLTACGPLSNGAVKIFVAVADVDALVKKNSAIDQHAHTNTTSVYTSARV
FAMLPERLSTDLTSLNPGQERLAIVTEMVVDAEGAVTHSTVHRARVRNHAKLAYDAVAAW
IEGEGDLPEAARAVPGMDEQLRTQDAVAQRMRARRRAAGSLDLETFQPRAVFDGDRVVDI
RQQAQNRARQLIEEFMIATNTCTAQFLAQHGGSALRRVVRSPERWLRIVEVASKYGEALP
KEPDSRALEGFLARQRKADPLRFPDLSLVIIKLMGSGEYVVEHARGEPIGHFGLAVRDYT
HSTAPNRRYPDLVSLRMVKALLSGERPPYGLAELATLAEHCTHQEDAAQKVERSVRKSEA
ALFMQGLIGQQFDAIVTGRTESATWVRIFTPPAEGLLVSGDFNLDVGAKIRVKLVSTNVE
RGFIDFEQAH
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacaacacacatttcaccgcagcgatctggtgcgcattgccatcgacgccatg
aaagagcggggcctggagcccgagtttccgccgcgcgccctgcagcagctgcagaccatt
ggggccgccgggcaggacgacgacccgcgcatccgcgacctcacggcattgccctggtgc
tcgatcgacaacgacgactcgctcgacctcgaccagctcacggcctgcggccccctgagc
aacggcgccgtgaagatttttgtcgccgtggccgatgtggacgccttggtcaaaaagaac
tctgccatcgaccagcacgcgcacaccaacaccacgtcggtctatacctcggcgcgggtg
tttgccatgctgcccgagcggctttccaccgacctcacctcgctgaaccccggccaggag
cgcctcgccatcgtgaccgagatggtggtggatgccgaaggcgccgtcacccattccacc
gtgcaccgggcgcgggtgcgcaaccacgccaagctggcctacgacgccgtggccgcgtgg
atcgagggcgaaggcgacctgcccgaagccgcgcgcgccgtgcccggcatggacgagcag
ctgcgcacccaggacgcggtggcccagcgcatgcgcgcgcgccggcgcgccgcgggctcg
ctggatctggaaaccttccagccgcgtgccgtgttcgatggcgaccgcgtggtggacatc
cgccagcaagcgcaaaaccgggcgcgccagctcatcgaagaattcatgatcgccaccaac
acctgcacggcgcagtttctggcgcagcacggcggcagcgccctgcggcgggtggtgcgt
tcgcccgagcgctggctgcgcatcgtggaagtggccagcaaatacggcgaggcgctgccc
aaggagcctgattcgcgtgcgctcgagggctttctggcgcgccagcgcaaggccgatccg
ctgcgctttcccgacctgtcgctggtcatcatcaagctgatggggtcgggcgaatatgtg
gtggagcatgcccggggcgagcccatcggccacttcggcctggcagtgcgcgactacacg
cattccacggcgcccaaccgccgttaccccgacctggtgagcttgcgcatggtgaaggcg
ctgctgtcgggcgagcgtccgccctatggcctggccgagctggccacgctggccgagcat
tgcacccaccaggaagacgcggcgcaaaaggtggagcgcagcgtgcgcaaatccgaggcg
gcgctgttcatgcaggggctgatcggccagcagtttgacgccatcgtcaccggccgcacc
gaaagcgccacctgggtgcgcatcttcacgccgccggccgagggcctgctggtgtcgggt
gatttcaatctcgacgtgggggcgaagatccgcgtgaagctggtcagcaccaatgtcgag
cgcggcttcatcgatttcgagcaggcgcactga
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