Acidovorax carolinensis NA2: CBP33_12235
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Entry
CBP33_12235 CDS
T04914
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
acid
Acidovorax carolinensis NA2
Brite
KEGG Orthology (KO) [BR:
acid00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
acid01011
]
CBP33_12235
Enzymes [BR:
acid01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CBP33_12235
Peptidoglycan biosynthesis and degradation proteins [BR:
acid01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CBP33_12235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM1_NFP_LYK
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
ART48796
LinkDB
All DBs
Position
2610537..2612045
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AA seq
502 aa
AA seq
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MKILRFACLAGLLWLTGCATNGTTSSGPFNTDSSPGTASHTPVIPKGPLSPITAGRAASS
EVASLSTPADLWERIRRGFAMPDLQHELVQDREQWYASRPDYMQRMTERSSKYLFHIVEE
LERRGMPTELALLPYIESAFNPQAVSSAKAAGMWQFMPATGNYFDLKQNAFRDDRRDVLA
STRAALDYLQKLYGMFGDWHLALAAYNWGEGSVGRAIAKNQKAGLGTRYTDLNMPAETRL
YVPKLQAVKNIVANPEAFRTELPLIENHPYFQTVDITHDIDVAVVAQLSGVREADFRALN
PSFHRPTIFAAGTPQILLPWDNARVFQRNLEAKNQGQYASWTVWSVPTTMSVAEAAQRTG
MGEADLRALNNIPPRMLIKAGSALMVPRTTTTRQDVSAHLADNGQLAFTPEIVTRRTTVR
AGKRDTVRSIAQRYRVSADHVADWNDVKANAAFKAGQQIVMFLPVRMGQDTKADRSASRK
AAPKAAASNPTRKGGKPAKKRR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgcgcttcgcctgccttgcaggtctgctgtggctgaccggctgtgccacc
aatggcacgacctccagcggcccgttcaacaccgattcgtcgccaggcaccgccagccac
acccccgtcatccccaaagggcctctgagcccgatcacggctggccgtgccgccagcagc
gaagtggcctcgctgtccacccccgccgacctgtgggagcgcattcgccgcggctttgcc
atgcccgacctgcagcacgaactggtgcaggaccgcgagcagtggtacgccagccgcccc
gactacatgcagcgcatgaccgagcgctccagcaaatacctgttccacattgttgaagaa
ctggaacgccgaggcatgcctaccgaactggcactgctgccctatatcgaaagcgcgttc
aacccacaggccgtgtccagtgccaaggccgccggcatgtggcagttcatgcccgccact
ggcaactacttcgacctcaagcaaaacgcctttcgcgacgaccgccgcgatgtgctcgcg
tccacccgcgccgcgctcgactacctgcaaaaactttatggaatgtttggcgactggcac
ctggccctggccgcctacaactggggcgaaggcagcgtgggccgggccattgccaagaac
cagaaggcggggctgggcacccgctacaccgatctgaacatgccggccgaaacgcggctg
tatgtgcccaagctgcaggccgtgaagaacatcgtggccaaccccgaggcgtttcgcacc
gagttgccactgatcgaaaaccacccctatttccagacggtggacatcacccacgacatc
gacgtggccgtggtcgcccagctgtccggggtgcgcgaagccgattttcgcgcgctgaac
ccctcgttccaccgccccaccatttttgccgccggcaccccccagatcctgctgccatgg
gacaacgcgcgcgtgttccagcgcaacctggaagccaagaaccaggggcaatacgccagc
tggacggtgtggtccgtgcccaccaccatgagcgtggccgaggccgcccagcgcaccggc
atgggcgaggcggaccttcgggcgctcaacaacatcccgccgcgcatgctcatcaaggcg
ggctcggcgttgatggtgccgcgcaccaccaccacccgccaggacgtttcggcccacctg
gcagacaacggccagctggcctttacgcccgaaatcgtcacccgccgcaccacggtgcgc
gccggcaagcgcgacaccgtgcgcagcattgcgcagcgctatcgcgtcagtgccgaccat
gtggcggactggaacgatgtgaaggccaacgccgccttcaaggccggccagcagatcgta
atgttcttgcctgtgcgcatgggccaagacacaaaggccgaccgcagcgccagccgcaag
gccgcccccaaagccgccgcgtccaaccccacgcgcaagggtggcaaacccgccaagaag
cggcgctag
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