Acidovorax carolinensis NA2: CBP33_14065
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Entry
CBP33_14065 CDS
T04914
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
acid
Acidovorax carolinensis NA2
Pathway
acid03030
DNA replication
acid03410
Base excision repair
acid03420
Nucleotide excision repair
acid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBP33_14065
03410 Base excision repair
CBP33_14065
03420 Nucleotide excision repair
CBP33_14065
03440 Homologous recombination
CBP33_14065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acid03032
]
CBP33_14065
03400 DNA repair and recombination proteins [BR:
acid03400
]
CBP33_14065
Enzymes [BR:
acid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBP33_14065
DNA replication proteins [BR:
acid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CBP33_14065
DNA repair and recombination proteins [BR:
acid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CBP33_14065
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBP33_14065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
SSO1393-like_WHD
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
ART49117
LinkDB
All DBs
Position
complement(3017653..3020451)
Genome browser
AA seq
932 aa
AA seq
DB search
MSDKKTLLLVDGSSYLYRAFHAMPDLRAVPGDPASPATGAIRGMINMMQALRKEVHADYA
ACVFDAKGPTFRDAIYPAYKQQRSPMPDDLRAQIPPIHEVVRLMGWKVLDVPGVEADDVI
GTLAVTAARQGIEVIVSSGDKDLAQLVDEHITIIDTMNGKRRDVAGVEAEFGVPARLMVD
FQTLVGDQVDNVPGVEKVGPKTAAKWLQEYGSLDAVVASADKIKGVAGENLRKALDWLPT
GRQLLTIKTDCDLNGWVEGLPSLDAITIGAPDAPRLKDFYEQYGFKGLARALGDATSSAA
VAATPAVAMPGQSGDLFADHSASPVAEAAQHRAVVYDTILNWTDFDHWLQRLQKAELVAL
DTETTSLDEMRAEIVGISFSVQPGEAAYIPLAHAGPDAPAQLPRDEVLARLQPWLEDGKR
HKLGQHIKYDRHVFANHGIEVHGYVHDTMLQSYVLEVHKPHNLTSLAERHTGRTGISYED
LCGKGAHQIPFAQVPVDKAAAYSCEDSDQTLDVHNALWPLLQADDKLRFIYELEIASSEA
LFRIERNGVLIDAPTLAAQSHELGQRIVQLETDAYAIAGQPFNLSSPKQLGEIFFDKLGM
PVVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLVKLKGTYTDKLAQLALPRTGRVH
THYAQAVAVTGRLSSNDPNLQNIPIRTAEGRRIREAFVAPAGCVIASADYSQIELRIMAH
LSGDHALLHAFHAGLDVHRATAAEVFGVALDQVTSEQRRYAKVINFGLIYGMSSFGLAKN
LGIETKAAAAYIDRYFQRYPGVKQYMDETKAAAKSMGYVETVFGRRLYLPEINSPNGPRR
AGAERAAINAPMQGTAADLIKLAMVAVQKELDAHQPGIKMIMQVHDELVFELPEGDVDWL
KSHIPRLMAEVAALKVPLLAEVGVGPNWDKAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaaaaagaccctgctgctggtggatggctccagctacctctaccgcgccttc
catgccatgcccgacctgcgcgccgtgcccggcgacccggccagccccgccacgggcgcc
atccgcggcatgatcaacatgatgcaggcgctgcgcaaagaggtgcatgccgactacgcc
gcctgcgtgttcgacgccaagggccccaccttccgtgacgccatctaccccgcctacaag
cagcagcgcagccccatgcccgacgacctgcgcgcgcagatcccgcccatccacgaggtg
gtacgtctgatgggctggaaagtgctcgacgtgcccggcgttgaggccgacgacgtgatc
ggcacgctggccgtgacggcggcgcgccagggcatcgaggtcatcgtgagcagcggcgac
aaggacctggcgcagctggtggacgaacacatcaccatcatcgacaccatgaacggcaag
cgccgcgacgtggccggcgtggaggccgagttcggcgtgcccgcgcggctgatggtggat
tttcagaccctggtgggcgaccaggtggacaacgtgcccggtgtggaaaaggtgggcccc
aagacggccgccaagtggctgcaggaatacggctcgctcgacgccgtggtggccagcgcc
gacaagatcaaaggcgtggccggcgagaacctgcgcaaggcactcgattggctgcccacg
ggccgccagctgctcaccatcaagacagactgcgacctgaacggctgggttgagggcctg
ccgtcgcttgacgccatcaccatcggcgcgcccgatgcgccccggctcaaggatttttac
gagcaatacggcttcaagggcctggcgcgcgctctgggcgatgccacgtcttcggccgca
gtggcggccacgcccgccgtggccatgccgggccaaagcggcgacctgtttgccgaccat
tccgccagccccgtggccgaggcagcgcagcaccgcgcggtggtgtacgacaccatcctg
aactggaccgactttgaccactggctgcagcgcctgcaaaaggccgagctggtggcgctg
gacaccgagaccacctcgctcgacgaaatgcgcgccgaaatcgtcggcatcagtttcagc
gtgcagcccggcgaggcggcctatattccgctggcccatgccggtccggatgcgcccgcg
caactgccgcgcgacgaagtgctggcgcgcctccagccctggctggaagacggcaagcgc
cacaaactgggtcagcacatcaaatacgaccgccatgtgttcgccaaccacggcatcgag
gtgcacggctacgtgcacgacaccatgctgcaaagctatgtgcttgaagtgcacaagccg
cacaacctcaccagcctggccgagcgtcacaccggccgcaccggcatcagctacgaagac
ctgtgtggcaagggcgcgcaccagattccgtttgcccaggtgccggtagataaagctgcg
gcctattcgtgcgaggactccgaccagacgctcgacgtgcacaacgcgctgtggccgctg
ctgcaggccgacgacaagcttcgctttatttacgagctggaaatcgccagcagcgaggcg
ctgttccgcatcgagcgcaacggcgtgctgatcgacgcccctacgctggccgcgcaaagc
catgagctgggccagcgcatcgtgcagctcgaaaccgatgcctatgcgattgccggccag
ccattcaacctcagcagccccaagcagctgggcgaaatcttcttcgacaagctgggcatg
cccgtggtgaaaaaaaccgccaccggcgcgcgcagcaccgacgaagaggtgctggaaaag
ctcgccgaggactacccgctgcccgccaagcttctggagcaccgcagcctggtcaagctc
aagggcacctacaccgacaagctcgcccaactggcgctaccgcgcaccggccgcgtgcac
acgcactatgcgcaggccgtggccgtaacggggcggctgtccagcaacgaccccaacctg
cagaacatccccatccgcacggccgagggccggcgcatccgcgaagcctttgtggcgccc
gccggctgcgtgatcgccagcgctgactacagccagatcgagctgcgcatcatggcccac
ctctcgggcgaccatgcgctgctgcacgcctttcatgccggcctggacgtgcaccgcgcc
accgccgccgaagtgtttggtgtggcgctggaccaggtgacgagcgagcagcgccgctac
gccaaggtcatcaactttggcctgatctatggcatgagcagctttggcctggccaagaac
ttagggatagagaccaaggccgccgccgcctacatcgaccggtacttccagcgttacccc
ggcgtgaagcagtacatggacgaaaccaaggccgccgccaaatccatgggctatgtcgag
acggtgtttggccgccgcctttacctgcccgaaatcaactcgcccaacggcccgcgccgc
gccggcgccgagcgcgccgccatcaacgcgcccatgcagggcacggcggccgacctcatc
aagctggccatggtggcggtgcaaaaagaactcgatgcgcaccagcctggcatcaagatg
atcatgcaggtgcacgacgaactcgtgttcgagttgcccgagggcgacgtggactggctc
aagagccacatcccgcgcctgatggccgaggtggcagcgctcaaggtgccgttattggcc
gaggtgggcgtggggccgaactgggacaaggcgcattga
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