Acidovorax carolinensis NA2: CBP33_14175
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Entry
CBP33_14175 CDS
T04914
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
acid
Acidovorax carolinensis NA2
Pathway
acid03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acid00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CBP33_14175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acid03019
]
CBP33_14175
03009 Ribosome biogenesis [BR:
acid03009
]
CBP33_14175
Messenger RNA biogenesis [BR:
acid03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CBP33_14175
Ribosome biogenesis [BR:
acid03009
]
Eukaryotic type
Pre-60S particles
RNases
CBP33_14175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
4HB_MCP_1
Motif
Other DBs
NCBI-ProteinID:
ART50203
UniProt:
A0A240U8H9
LinkDB
All DBs
Position
complement(3043708..3044286)
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AA seq
192 aa
AA seq
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MSEANNPVPPVLSKSDQNLVWLDCEMTGLEPDTDRLLEIAVIVTGPQLEPRIEGPVLAIH
QADELLDKMDAWNKGTHGRSGLIDKVKASTVTEAEAEQQILEFLARYVPKGTAPMCGNSI
GQDRRFLVRYMPKLERFFHYRNVDVSTLKELAKRWKPEAYSSFKKAQKHTALADVHESID
ELAHYRKNLLSV
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagccaacaaccccgtaccccccgtgctttccaaatcggaccagaacctggtc
tggctggactgcgagatgaccggcctggagcccgataccgaccgcctgctggaaattgcc
gtgatcgtgaccggcccgcaactggagcctcgcatcgaaggcccggtgctggccattcac
caggcagatgaactgctcgacaagatggatgcctggaacaagggcacgcatggccgtagc
ggcctgatcgacaaggtgaaggcctctacggtgaccgaggccgaggcggagcaacagata
ctggaattcctggcgcgatatgtgcccaaggggactgcgcccatgtgtggcaacagcatt
ggccaggaccggcgctttctggtgcgctacatgcccaagctggagcgcttctttcactat
cgcaacgtggacgtgagcaccctcaaggaactggccaagcgctggaagcccgaggcctac
agcagcttcaagaaggcgcaaaagcacacggcgctggccgatgtgcacgaaagcatcgac
gaactggcacattaccgcaagaacctgctgtcggtttga
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