Acidovorax carolinensis NA2: CBP33_16860
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Entry
CBP33_16860 CDS
T04914
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
acid
Acidovorax carolinensis NA2
Pathway
acid03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acid00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CBP33_16860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acid03021
]
CBP33_16860
03400 DNA repair and recombination proteins [BR:
acid03400
]
CBP33_16860
Enzymes [BR:
acid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CBP33_16860
Transcription machinery [BR:
acid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CBP33_16860
DNA repair and recombination proteins [BR:
acid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CBP33_16860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ART49580
UniProt:
A0A240U5E8
LinkDB
All DBs
Position
complement(3589804..3590796)
Genome browser
AA seq
330 aa
AA seq
DB search
MQTNLLKPKAINVEQLGHNRAKVALEPFERGYGHTLGNAIRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTARDIQTPHDVEI
VNPDHVIANLSAGGKLDMQIKVEKGRGYVPGNLRRYADESTKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVVEIETNGAITAEDAVRASAKILVEQLAVFAQLEGGELAAFDA
PAGPRGNATFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKS
LNEIKEVLASRGLTLGMKLENWPPAGLDKR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaatttgctgaaacccaaggcgattaatgtcgaacagcttggtcacaaccgt
gccaaggtggcgcttgagccgttcgaacgtggctacggtcacacattgggcaacgccatt
cggcgtgtcctgctgtcgtccatggtgggttacgcagcgacggaagtcaccattgcgggc
gttctgcacgaatactcgtccattgacggtgttcaagaggacgtggtcaacattctcctt
aacctcaagggcgtggtgttcaagctgcacaaccgtgacgaggtgacgctgagcctgcgc
aaggatggtgaaggcgttgtcactgcgcgggatattcagacaccgcatgacgtggaaatc
gtcaaccctgaccatgttatcgccaacctgtccgcaggtggcaagctggacatgcagatc
aaggtcgagaagggtcgaggctacgtgccaggcaacctgcgtcgctatgcagacgagtcg
accaagtcaattggccgaatcgtgctggatgcgtctttctcccctgtgaagcgcgtcagc
tatacagtggaaagcgcccgtgtcgagcaacgtactgacctggacaagctggtcgtcgag
atcgaaaccaatggtgccatcactgccgaagacgctgtgcgcgcctcggccaagatcctg
gtggagcagctggctgtgttcgcacagctggaagggggcgagctggctgcatttgatgca
cctgcaggcccacgcggcaatgcgacgttcgatccgattctgctgcgtcctgtggatgag
ctggagttgaccgttcgctctgccaactgcctgaaggccgagaacatctactacattggt
gacctgatccagcgcaccgaaaacgagttgctcaagacgcctaacctgggtcgcaagtcg
ctcaacgagatcaaggaagttctggcttcgcgcggtctcactctgggaatgaagcttgag
aactggcctccagccggtttggacaagcgttaa
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