Acinetobacter sp. BHS4: KIP84_03225
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Entry
KIP84_03225 CDS
T09875
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
acie
Acinetobacter sp. BHS4
Brite
KEGG Orthology (KO) [BR:
acie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acie03016
]
KIP84_03225
Enzymes [BR:
acie01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
KIP84_03225
Transfer RNA biogenesis [BR:
acie03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
KIP84_03225
Prokaryotic type
tRNA splicing ligases
KIP84_03225
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
QVR68605
LinkDB
All DBs
Position
complement(656842..658047)
Genome browser
AA seq
401 aa
AA seq
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MGIQKILNKEALYGVPVKIFTQDIDSESIEQLKKMAQLQFIYSHIAVMPDVHVGKGATVG
SVIPTKHAIIPAAVGVDIGCGMNAIRLSLKASQLPDNLSRLRDAIERKVPVGFALHKQVK
AKASSIIPLEKRLEPIIKKHPGLVRMLRQFDATWQKQLGTLGGGNHFIELCIDENQDIWV
MLHSGSRGLGNVIGTYFIELAKKEAQHRFGHVPDKDLSYFAEGSKSFDDYVEAVEWAQEY
AFENRKEMMRLILEAIRPLLPSFQMTKEAINCHHNYVSRETHFGENLLITRKGAIRAGLD
ELGIIPGSMGARSYIVKGKANPESFCSCSHGAGRKMSRSKAKVLFNQQDLIEQTQGIECR
KDSGVVDEIPSAYKDIDEVMANQSDLIEVVHTLKQVLCIKG
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggcatacaaaaaatattaaacaaggaggcactctatggtgtccctgttaaaattttc
actcaagacatagatagtgaaagtatcgaacaactcaagaaaatggcacagctgcaattc
atctattctcatattgcagttatgcctgatgtgcatgtgggcaaaggtgctactgtaggt
agtgttattcctactaaacacgccattattcctgctgctgtaggagttgacattggatgt
ggaatgaatgcaattcgcttgagtttaaaggcttcacaattacctgataacttaagtcgt
ttgcgtgatgcgatcgaacgtaaagttcctgttggctttgctttgcataaacaagtcaaa
gcgaaagcttctagcattattccacttgaaaaacgattagaaccaattatcaagaagcat
cctggtcttgtccgaatgcttcggcaatttgatgcaacatggcaaaaacaacttggtact
ttaggtggtggcaatcactttatagagttatgtattgatgagaatcaagatatatgggta
atgctacattcaggtagcagagggcttggtaatgttattggtacttactttattgagtta
gccaaaaaagaagctcagcatcgctttggccatgtaccagataaagacttaagttatttt
gctgaaggctcaaaaagttttgatgattatgtagaagctgtagagtgggcacaagaatat
gcttttgaaaatcgcaaagagatgatgcgattaattttagaagcgatccgccctcttcta
ccttcttttcaaatgacaaaagaagcgattaattgtcatcataattatgtaagccgtgaa
acacattttggcgaaaatctattgattacccgaaaaggtgcaattagagcaggcttagat
gagctaggtattattccaggttcaatgggcgcacgatcttatattgttaaaggcaaagca
aatcctgaatcattttgttcttgttctcatggcgctggtcgcaagatgagcagaagtaaa
gcaaaagttctttttaatcagcaagatcttattgaacaaacccaaggtattgaatgtcgc
aaagatagtggcgttgtcgatgaaattccaagcgcctataaagacattgatgaagtcatg
gcaaatcagtcagacctcattgaagtcgttcatactctaaaacaagttttatgtattaaa
ggttaa
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