Acinetobacter sp. BHS4: KIP84_10160
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Entry
KIP84_10160 CDS
T09875
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acie
Acinetobacter sp. BHS4
Pathway
acie03030
DNA replication
acie03430
Mismatch repair
acie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KIP84_10160 (dnaE)
03430 Mismatch repair
KIP84_10160 (dnaE)
03440 Homologous recombination
KIP84_10160 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acie03032
]
KIP84_10160 (dnaE)
03400 DNA repair and recombination proteins [BR:
acie03400
]
KIP84_10160 (dnaE)
Enzymes [BR:
acie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KIP84_10160 (dnaE)
DNA replication proteins [BR:
acie03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KIP84_10160 (dnaE)
DNA repair and recombination proteins [BR:
acie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KIP84_10160 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QVR66433
LinkDB
All DBs
Position
2123299..2126862
Genome browser
AA seq
1187 aa
AA seq
DB search
MQFVHLGIYTEFSITESIVRIPDLVNAAVKDQMPALALTDLSNLHAAVKFYNSCLKKGIK
PLLGSTIRLDDAQHRATLLAMSNVGWKSLTEIVSRGFIEGQQLSIPCVKKEWVLEQHQDI
IVLLGQHSDVGQMLCSSNPQKAAPLLEAWIEKFGNRVYLALTRTDRPGEEDFIQEAAKLA
AQYNVGVVAHNDVHFVEKEDFEAHEARVCIADGYVLADDRRPRLYSPEQHFKTSDEMIEL
FSDIPSAIENTYNIAKRCNVSLQLGTYFLPDYPIPDGFTIDTYFEHLSKIGLEERLDYLY
PLEKRGEDWPEIRKPYDERIDYEVGIILKMGFPGYFLIVMDFIQWAKNNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVSRTYGRE
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMVPTKPLGVDLATAIEMEPQLKDI
VTNPSNPDNDDASEIWEMALKLEGITRNTGKHAGGVVIAPGKITDFSAVLCDEDGTSRVA
QYDKDDVEAAGLVKFDFLGLRNLTVIEDAIQNINKNRDSNDPLIISHVPLDDAKAYSVFA
DANTTAVFQFESVGMKRMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGDFEYL
HPLLEGVLEPTYGIMVYQEQVMQTAQICAGYTLGGADLLRRAMGKKKPEEMVKQRQIFLA
GAAEKGIDESTANHIFDYMEKFAGYGFNKSHAAAYALVAYHTAWLKAHYPAEFMAAVMSS
EMQNTDSVVFLIDDCRNNGLEVLPPSVNMSTYHFHASDDKTIVYGLGAIKGVGEQAMQSV
IDSRRQFGPYTDLFDFCHRIDLKKINKRTLEALIRAGALDCLGIERASLMAQLPEAVQAA
EQARSNRESGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRQE
LKAFIPVKLNEITATRRGVTTVYAGLVIDVANFPNRVVIVLDDGTARIEVSCNHERFQRF
KDIIQVERVVVFEGEIYEREGFERPMGRLTKAFTLNEIRQKRANSIQIKLTEEFMQATLA
KDLQNIILPFCNVDMHQHITLQLLIDQPYAQAELQLGPQWKVAPLDELLAKLRDYFGKDN
IYIEYQVKSKAAKAAEPARPQTVASPPADMTMDDALDLYQSEVSQYS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttgttcatctcggtatttatacagaattttcgattacagagtcgatagttcgc
atacctgacttggtcaacgctgcggttaaggaccaaatgcccgcgctggcattaaccgat
ctatcaaaccttcatgcagcagtaaaattttataattcttgtttaaaaaaaggaattaaa
ccgcttttaggtagcacaattcgccttgacgatgctcaacatcgtgcaactttacttgca
atgagtaatgtaggctggaaaagtcttaccgaaatcgtttcacgcggttttattgaaggt
caacaactcagtattccatgtgtaaaaaaagaatgggtacttgaacagcatcaagatatt
attgttttactcggccaacatagtgatgtgggtcagatgctttgctcatctaaccctcaa
aaagcagctccgcttttagaagcatggatcgaaaaatttggtaaccgtgtttatctggct
ttaacacgcaccgatcgtcctggtgaagaagactttattcaagaagccgctaaacttgct
gcccaatataatgtcggtgtagttgcgcataatgatgtgcactttgtagaaaaggaagat
tttgaggcccacgaagcacgtgtttgtattgctgatggctatgtattagcagatgaccgt
cgtccacgcttatatagtcctgagcaacattttaaaacctccgatgaaatgattgagttg
ttttcagatatcccaagtgctatcgaaaacacctataacattgcaaaacgctgtaatgtt
agcttacaactaggcacctactttttacctgactatccaattccagatggctttaccatc
gacacctactttgagcatttgtcaaaaataggtctagaagaacgtttagattatctctac
cctctcgaaaaacgtggcgaagactggccggagattcgtaagccttacgatgaacgaatt
gattacgaagttggtattatcctcaaaatgggattcccgggttacttccttatcgtcatg
gacttcattcagtgggcaaaaaataatggcgttcctgtaggacctggtcgtggttcaggt
gcgggttcactcgttgcatatagcttaaaaattactgaccttgatccacttcgttacgat
ctacttttcgaacgtttcttaaacccagaacgtgtttcgatgcccgactttgacgtcgac
ttctgtattgccggacgtgaccgcgttattgattatgtttcccgtacttatggccgtgaa
gccgtgtcgcaaattgcaactttcggtacgatggcggcaaaaggtgcaattcgtgacgtt
gcccgtgtattgggtaagtcttacggtttagctgaccgtatctcaaaaatggtgcctacg
aaaccactcggtgtggacttagccactgctatcgagatggaacctcagcttaaagatatc
gttaccaacccatctaacccagataatgatgatgcgagtgaaatctgggaaatggcatta
aaactagaaggtatcacccgaaatactggtaaacatgccggtggtgttgttattgcaccc
ggtaagattaccgatttctcggctgtactttgtgatgaagatggaactagccgtgttgct
caatatgataaagacgatgtagaagcagctggtctcgtcaaattcgacttcttgggttta
cgtaacttaaccgttattgaagacgcaattcaaaatattaataaaaatcgcgatagtaat
gatccgctcattatttcgcatgttccacttgatgatgctaaagcatactctgtctttgcc
gatgcaaatacaacagcggtattccagtttgaatccgtcggcatgaaacgaatgctcaaa
gaagcacgtccaagtaaatttgaagagattattgcattcgtatcattgtatcgtcctggt
ccaatggatcttattcctgactttattcaccgtatgcatggtggagattttgaatatctt
cacccacttcttgaaggtgtattagagccaacttacgggattatggtttaccaagaacag
gtgatgcagacagcacagatctgtgcgggttatacgctcggtggcgcggatttactacgt
cgtgcaatgggtaaaaagaaacctgaggagatggttaagcaacgccaaatcttcttggca
ggtgctgctgaaaaaggaattgatgaaagtacagccaaccatatctttgactatatggaa
aagttcgcaggctatggtttcaacaaatctcacgccgcagcttatgccctcgttgcttac
cacactgcctggttaaaagcacattatcctgctgagtttatggcagcagtaatgtcatcg
gaaatgcagaacactgacagtgttgtatttttaattgatgactgccgaaataatggccta
gaagttttaccaccatcagtcaatatgtcgacttatcatttccatgcgagcgatgataaa
actattgtatatggtttaggtgcaattaaaggtgtcggcgaacaagcgatgcagtcagtt
attgactctcgtcgacaatttggtccttatacagatttattcgatttttgccatcgtatt
gatttgaagaaaatcaataagcgtactcttgaagctttaattcgtgcaggtgcactcgat
tgcttgggaattgaacgtgcaagcttaatggcacaattgcctgaagctgttcaagctgct
gaacaagcgcgcagtaaccgtgaaagcggtattatggatttatttggtgaggttgaagaa
gttcagcgtaagccagctaaacctgttaaaccgtggagtgacgaggttcgtctaaaaggc
gaaaaagacacgcttgggttatatttaacgggccacccaattgatgtttaccgccaagag
cttaaggcttttattccggtaaaacttaatgaaattacggctacacgtcgtggtgttaca
acagtctatgcgggtttagtcattgacgtcgcaaactttccaaatcgcgtagttattgta
ctagatgatggtacagctcgtattgaagtaagttgcaaccatgaacgtttccaacgtttt
aaagatattatccaagttgagcgtgttgtcgtctttgaaggcgaaatttatgaaagagaa
ggctttgaacgtccaatgggccgtttaaccaaggcttttactttaaatgaaatacgacaa
aaacgtgctaatagcattcagatcaaattaacagaagagtttatgcaagccactttggca
aaagatttacaaaacataatcttgccattttgcaatgtagatatgcatcaacatatcact
ttacaactcctgattgatcaaccttatgctcaagccgagcttcaacttggtccgcaatgg
aaagttgctcctctcgatgaattacttgctaaactcagagattattttggtaaagataat
atttatattgaatatcaagtaaagtcgaaagcagctaaagcagcagaacctgctcgtccg
caaaccgttgcttcccctcccgcggacatgactatggacgatgcattggatttataccaa
agcgaagtttctcaatattcgtaa
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integrated database retrieval system
