Acinetobacter sp. LUNF3: MN200_03030
Help
Entry
MN200_03030 CDS
T11100
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
acif Acinetobacter sp. LUNF3
Brite
KEGG Orthology (KO) [BR:
acif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acif03009
]
MN200_03030 (rlmD)
Enzymes [BR:
acif01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MN200_03030 (rlmD)
Ribosome biogenesis [BR:
acif03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MN200_03030 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
PCMT
Methyltransf_25
Ubie_methyltran
TRAM
MTS
Methyltr_RsmB-F
Cons_hypoth95
Methyltransf_11
TRM5-TYW2_MTfase
Methyltransf_23
CMAS
GCD14
UPF0020
Methyltransf_12
RrnaAD
Methyltransf_32
PrmA
MetW
Methyltransf_15
FtsJ
Motif
Other DBs
NCBI-ProteinID:
UNT43793
LinkDB
All DBs
Position
641696..643084
Genome browser
AA seq
462 aa
AA seq
DB search
MKHRAKPRPTQQPSYIFQVESLSHEGRGIAHYGSHPDHPADKQGKKVFISYALPGETVKA
QITHVVKRLEEADAIQLLSEASTFRVEPKCPHFKSCGGCNMQHIHPDEQIRLKQDVLKSH
LQHFAGIQPEEWLPPLRSLREDYRRKARIGVRYLPHKDQLVVGFRERQTNKLTSIDRCLV
LDQAFGSITRLKQLLQSLTAKAAIGHIELAMGDCDIALTVRHTEKLNTEDVNRLKQFALD
RGWQLYLQAAGPDSLKRMDDEHAEMRLHYRLNDFDVAFGFNPHDFTQVNSTINPQMVKLA
CDLLDLKQGERVLDLFCGLGNFSLPLARCVGATGQVVGVEGSEEMVQRGAENAERNALRQ
LKFFSQDLTKDFSHHSWANQGFDALLIDPPRAGAEEIMHYMPNFGAKRIVYVSCNPATLA
RDAGLLVQQGYRLVKAGVMDMFTHTGHVESIALFEKVNEIND
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatagagccaaacctcgtccaactcaacagcccagttatatttttcaggttgag
tcactttcgcatgaaggacgtggcatagcgcactatggttcgcatccagaccatcctgcg
gacaagcagggtaaaaaagtctttattagctatgcattgccgggtgaaacggtcaaagcg
cagattacccatgtagtaaagcgtttagaggaagccgatgctattcaactcctcagtgaa
gcctctacttttcgtgttgagccgaagtgcccgcattttaaaagctgtggtggctgtaat
atgcagcacattcatcccgatgaacaaattcgtttaaagcaagatgtgcttaaatcacat
ttgcagcattttgcggggattcaaccggaagaatggttgccgcctttgcgctctttacgt
gaagactaccgccgtaaagcacgcattggggtgcgttatttgccacataaagaccaattg
gtcgtgggttttcgagagcgtcaaaccaataaactaacttcaattgatcgttgtttggtg
ttagatcaagcgtttggttcgatcacacgcttgaagcagttactccaaagtctaacagcc
aaagcggctattggtcatatagaattggccatgggggattgtgacatcgccctcacggtg
cgacatactgaaaaattaaacacagaggatgtcaaccgattaaaacaatttgcgttagac
agagggtggcaattgtatttacaagctgcaggcccagacagtctaaagcgtatggatgat
gaacatgcagagatgcgtttacattatcgtttaaatgattttgatgtggcatttggattt
aacccacatgactttactcaagtaaactcaaccattaacccgcaaatggtgaaattggca
tgtgacttgctagatttaaaacaaggagagcgtgttctcgatttgttctgtggtctagga
aatttctctttgcctttggctcgatgcgtgggagcaacaggacaagtggttggtgttgaa
ggcagtgaagaaatggttcaacgtggtgcagaaaatgcggaacgtaatgctcttcgtcag
ttgaagttcttttcacaagatttaacaaaagatttctcgcatcattcttgggcaaatcaa
ggatttgatgcattattgatagatcctccacgtgcaggcgcagaggaaataatgcattat
atgcctaactttggtgcaaaaagaatcgtttacgtgtcgtgtaatccggcgacactcgca
agggatgcggggctgttggtacaacagggttatcgattagtcaaagctggtgtgatggac
atgtttacccacacaggtcacgttgagtcgatagcattgtttgaaaaagttaatgagata
aacgattaa
DBGET
integrated database retrieval system
