Acinetobacter sp. LUNF3: MN200_10240
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Entry
MN200_10240 CDS
T11100
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acif Acinetobacter sp. LUNF3
Pathway
acif03030
DNA replication
acif03430
Mismatch repair
acif03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MN200_10240 (dnaE)
03430 Mismatch repair
MN200_10240 (dnaE)
03440 Homologous recombination
MN200_10240 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acif03032
]
MN200_10240 (dnaE)
03400 DNA repair and recombination proteins [BR:
acif03400
]
MN200_10240 (dnaE)
Enzymes [BR:
acif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MN200_10240 (dnaE)
DNA replication proteins [BR:
acif03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MN200_10240 (dnaE)
DNA repair and recombination proteins [BR:
acif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MN200_10240 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
DUF3863
Motif
Other DBs
NCBI-ProteinID:
UNT42233
LinkDB
All DBs
Position
2102640..2106209
Genome browser
AA seq
1189 aa
AA seq
DB search
MHFVHLGIHTEFSITESIVRIPDLVKAAKAEGMPALAITDLSNLHAAVKFYGKCLDNGIK
PIMGSEVRLNDAEHRVTLLAMSNVGWRNLTELVSEGFIRGQQLDIPCVAKDWILEQNHDL
IALLGMRSDVGKMLCTSNPQKAEPLLEEWISKFGNRVYLALCRTERSGEDDFNYEALKLA
KKYNIGVVAHNDVHFMKEIDFEAHEARVCIADGYVLGDNRRPKNYSPEQYFKSGQQMAEL
FADIPSAIENTYQIAKRCNVTLQLGKYFLPDYPIPEGHTIDTYFAHLSKEGLEERLDFLY
PPETRDEYWPQKRKEYDDRLEYEIGTILKMGFPGYFLIVMDFIQWSKGNGVPVGPGRGSG
AGSLVAYSLKITDLDPLPYGLLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVARTYGRD
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMIPTKPLGLSLEESIEAEPQLKDI
VTNPSNPDNDDAAEIWEMALKLEGITRNTGKHAGGVVISPTKITDFSAVMCDADGTGRVA
QYDKDDVESAGLVKFDFLGLRNLTVIEDAVKNINKRIQLDVPLDIAFIPLDDKDAYLIFA
NANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL
HPLLEGVLEPTYGIMVYQEQVMQAAQYCAGYSLGGADLLRRAMGKKKPEEMVKQRQIFTE
GAAKKDIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYQTAWLKAHYPAEFLAAVMSS
EMQNTDNVVFLIDDCRHNDIEVLPPSVNMSIYQFHASDDKTIVYGLGAIKGVGEAAMQSV
IDSRIQDGPYRDLFDFCHRIDLKKINKRTLEALIRSGALDCLGIERSSLMAQLPEAVQAA
DQARSNRETGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRTE
LKAFIPNKINELTPTRRGVTTVFAGLVVDVANFPNRMMVTLDDGTSRIEVSANHERFMRF
KDIIQNEKVVVIEGEIYEREGFDRPMGRLTKAFTLNEIRQKRANCIQIRLDPTHSTKTLS
QDLKNILAPFCNVDMCNHIPLQLLLDYPYATAELHLGINWKVAPQDELLSKLRDYFGKEN
LHVEYQVKSKAAKAVSYEEAKPVDVPPPPADMSMDDAMDLYQAEVGQFS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcactttgtacatcttggtattcatacagaattttcaatcacagaatcaattgtacgt
atacctgatttagtcaaagctgctaaggcagaaggtatgccagcccttgccattactgac
ttatctaacttacatgctgctgtaaaattttatggtaaatgcttagataatggtatcaaa
ccgattatgggttcagaagttcgcttgaacgatgctgaacatcgcgtgacattattggcg
atgagcaatgttggctggcgtaatctaaccgaactggtttcagaaggttttatccgaggt
caacagcttgatattccttgcgttgcaaaagactggattttagaacaaaaccatgacctg
attgcgctacttggcatgcgatctgatgtcggcaaaatgctctgtacatcgaatccgcaa
aaagccgaacctttactcgaagaatggatttcaaaatttggcaatcgtgtttatttggct
ctatgtcgaacagaacgctcaggtgaagatgacttcaattatgaagccttaaaactggct
aaaaaatataatattggtgtagttgcacacaacgatgtgcacttcatgaaagaaatcgac
tttgaagcacacgaagcccgagtctgtattgccgatggttatgtattaggggataaccgc
cgaccaaaaaattactctccagagcaatattttaaatctggccaacaaatggcggaatta
tttgcagacattccctctgcaattgaaaatacttatcagattgctaaacgttgtaacgtt
accctgcaattaggtaaatacttcctgcctgactaccctattcctgaaggccataccatc
gacacctactttgcacatttatccaaagaaggtttagaagagcgtttagactttttatat
ccacctgaaacgcgtgatgaatactggcctcaaaaacgtaaagaatatgatgatcgttta
gagtatgaaatcgggaccattcttaaaatgggtttcccaggttacttcttgattgtcatg
gacttcatccaatggtctaaaggtaatggcgttccggttggtccaggccgtggttcaggt
gcaggttcacttgttgcctacagcttaaaaattacggatctcgatcctctcccatacgga
ctactcttcgaacgcttcttaaacccagaacgtgtttcaatgcccgatttcgacgtcgat
ttctgtattgctggtcgtgatcgtgtgattgactatgtggcgcgtacatacggacgcgat
gcagtatcacaaattgccactttcggtactatggcagctaaaggtgccattcgtgatgtg
gcacgtgtcttgggtaaatcctatggtttggcagaccgaatctcaaaaatgattccgacc
aaacctttaggtttaagcctcgaagagtcgattgaagcagagccacagcttaaagacatt
gtcaccaacccatctaacccagacaatgacgatgccgctgaaatttgggaaatggcatta
aaactcgaaggcattacccgtaacacaggtaaacacgcaggtggcgtggtcatttccccg
actaaaattaccgacttttctgccgtgatgtgtgatgcagatggtacaggccgtgttgcg
cagtacgataaagacgatgttgaatctgcaggtctagtaaagttcgacttcttgggtctg
cgcaacttaacggtcattgaagatgccgtgaagaatatcaataagcgcattcagctagat
gtgcctttagacattgcgttcattccgcttgacgacaaagatgcatacctcatctttgcc
aatgccaacaccacagcggtcttccagtttgaatccgtgggcatgaaaaaaatgctcaag
gaagcacgtccaagtaaatttgaagaaattatcgccttcgtatccctttaccgtccgggt
ccgatggacctgattccagactttatccaccgtatgcatggtggcgagtttgaatatctc
catcccctacttgaaggtgtacttgagccgacttacggcattatggtttaccaagaacag
gtaatgcaggcagcacagtattgtgcgggctatagcttgggtggtgcggacttactacgt
cgtgcgatgggtaagaaaaagcccgaagaaatggtcaaacagcgccaaattttcacggaa
ggtgcagcaaaaaaagatattgatgaagccactgccaaccatatctttgactatatggaa
aagttcgcaggttatggctttaacaaatcgcatgccgcagcttatgccttagtggcctat
caaacggcatggctcaaagcgcattatccagctgaattcttagcagcggtgatgtcttcg
gaaatgcaaaacaccgataacgtggtgttcttgattgacgactgtcgacacaatgatata
gaggtattgccgccttcggtcaatatgtctatctatcaattccatgcttcggacgacaaa
acgatcgtttatggactcggcgcaattaaaggtgtcggtgaagcggcgatgcagtcggtc
attgactcgcgtattcaagatgggccttatcgtgacttgtttgatttctgccatcgtatt
gatctgaaaaaaatcaataaacggactttagaagcattgattcgctcaggtgctttagac
tgcctcggcattgagcgctcaagtctaatggcgcagctacctgaagcggtacaagcggca
gatcaagctcgctcaaaccgtgaaacaggcatcatggacttgtttggtgaggttgaagaa
gtacaacgtaaacccgccaaacctgttaaaccttggtcagatgaagtccgtctcaaaggt
gaaaaagacactctagggttgtatttaaccggccacccaattgatgtctatcgcactgag
ttgaaagcgtttattccgaataaaattaatgaacttaccccaactcgtcgtggtgttact
acggtttttgcaggtcttgtggttgatgtagctaacttcccgaaccgaatgatggtgacc
ttagatgatggtacctcacggattgaagtctctgcgaatcatgaacgctttatgcgtttt
aaagacatcattcaaaatgaaaaagtggtggtgattgagggtgaaatttacgagcgtgaa
ggttttgaccgcccaatggggcgcttaaccaaagcatttacgctgaatgaaattcgtcaa
aaacgcgccaactgtattcaaattcgtctcgacccaacacatagcacaaaaacactaagc
caagatttaaaaaatattcttgcacccttttgtaatgtcgatatgtgtaaccacatcccg
ctgcaattgctgttggactacccgtatgccacggctgaattacacttagggattaattgg
aaagtggcgccgcaggatgaactactttctaaactccgtgactattttggtaaagaaaat
cttcatgtggaatatcaggtcaaatccaaagccgccaaagcggtgagctatgaagaagcc
aaacctgtagatgtaccaccgccacctgcggatatgagcatggatgatgccatggactta
tatcaagctgaagtcggtcagttctcttaa
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