Acinetobacter sp. LoGeW2-3: BS636_03625
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Entry
BS636_03625 CDS
T10253
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
acig Acinetobacter sp. LoGeW2-3
Pathway
acig03018
RNA degradation
Brite
Enzymes [BR:
acig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BS636_03625
Messenger RNA biogenesis [BR:
acig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BS636_03625
Ribosome biogenesis [BR:
acig03009
]
Prokaryotic type
rRNA processing factors
BS636_03625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ATO18820
UniProt:
A0A2D1IMQ8
LinkDB
All DBs
Position
750817..754269
Genome browser
AA seq
1150 aa
AA seq
DB search
MKRMLINATHAEEIRVALVTGQRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY
GAGRQGFLSMREIANTYYKADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL
AGRYLVLMPNNPKGGGISRQISGSVREELKEMLASLNVPRGMSVIVRTAGIGRSQEELQL
DLQHLMDLWAQIQSTANSGPSPMLVHQEAGVVTRAIRDYLRDDVAEILIDSEQAYNEAYN
FVKAVMPRQLDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID
INSAKSTRGQDVEDTALNTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKDRNQRMVEAKL
REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI
MRKVEEIALRERHGEVQVEVPVEIAAFLLNEKRHSLVYLEQTSSTRVTVLPHPHLETPHY
EISYNPEGFAPTSYERTEATRSSEKELGYESSEWHLEEEQHAQQAAAQAPAQQQNNGRNN
KRRNNQNQNQNAQQAPVAQQAPAAQVAAPAASPCAWLENLFVQKQAATVDQSRTANNAAA
AIEQMINGGAVSRGQFGQVAAPVAQPAPQHTAQPAPQPAAAPSSNAYLAPSTVAHKPERD
LAEKAEREEKSQRSHKKQRNNKHKEQREPQQHDNAPQQVHEEVVQLSRQEQRQEQREQKR
KNPRHQQEHNQDAQAEQQTAVPRRDRRNQQRPERPNRHRDQSVLNEQAAAPQAPAVVEAP
AANEQQVRVELIDAPRQDVTPTAMVVNVDQGQSEIVALNGTTPVVAAPTETAPEKAPAVA
TMAAELKEKTETVDLTEAPAPAAALEQATPKAEKARASNDPRQRRRDRRAAQGQQASQAA
QLRPSQVPTLGQYTVGSLIRHVYGEDCSVLIEQFGLMATFNRALDKFTKQYNESVVTAAT
AEKKPVTRDVEVSKAQPEPEPAPVLDLTPPKPVSEKRVANDPRERRRLAKLAAEQALVQA
KQAAQSEEKTEQAAQSEEKTEQAVAEPAAEAQAVAAQSAETVEVLNAEQPTKATPEQVVE
AAAAPTETEAPATAETATEEVAPAAENTAEATEVKAETVETEAEKAEKSPARPRRPRGRP
PKKANTATES
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtatgttgattaatgcaacacatgccgaagaaattcgcgttgcacttgtcact
ggtcagcgtctttacgattttgatttagagaatcgtacccgtgaacaaaagaaatctaat
atctataaaggtcacgtgactcgcgttgaaccttctttagaagctgtattcgttgaatac
ggtgcgggtcgtcaaggtttcttgtcgatgcgtgaaattgccaatacttattacaaagca
gatcctcgccaaacttcaaatatccgcgaactgattactgaaggcactgagcttttggta
caggtggaaaaagaagaacgtggtaataaaggtgctgccctttctactttcatctcttta
gctggccgttatttggttcttatgccaaataacccgaaaggtggcggtatcagccgtcag
atttcgggttcagttcgtgaagaattgaaagaaatgctagcctctttaaatgtgccacgt
ggtatgagcgtaattgttcgtaccgcagggatcggtcgttctcaagaagaactgcaactt
gatcttcaacatttgatggatctttgggcacaaatccaaagtactgcaaactctggccca
tcacctatgctggtacaccaggaagcaggtgtagtgactcgtgccatccgtgactattta
cgtgatgacgttgctgaaatcttaattgattctgagcaagcgtataacgaagcctataac
ttcgtaaaagcagtaatgccacgtcagctagacaagctaaaaacttatactttaaatgag
cctttattcgctcacttcggtatcgaaagccaaatccaaactgcttatgaacgtgaagta
aaacttccttctggcggttcgattgtgatcgaccaaactgaagcattagtgtcaatcgat
atcaactcagcaaaatcaacgcgtggtcaggacgttgaagatacagcgttaaataccaac
cttgaagctgctgaagaaattgcccgccaattacgtttacgtgatatcggtggtctggtt
gtaatcgatttcattgacatgaccaaagaccgcaaccagcgtatggttgaagcgaaactg
cgtgaagcaacacaaagcgaccgcgcacgtatccagttcggtcaattgtctcgtttcggt
ttgatggaaatgagccgtcaacgtctgcgcccttctctggaagaagcaactggctatgta
tgcccacgttgtcatggcacaggtatggttcgtgacctgcgttctctatcactttctatc
atgcgtaaagtggaagagattgcactgcgtgaacgtcatggtgaagttcaggttgaagta
ccggttgaaatcgcagcattcttattgaatgaaaaacgtcacagcttggtttacctggaa
caaacttcaagtactcgtgtgactgtattgccgcatccgcacttggaaacgccacattac
gagatttcttataatcctgaaggtttcgcaccgactagctatgaacgcactgaagcaaca
cgttcaagtgaaaaagaactgggttatgagtcttctgaatggcatttagaagaagagcaa
catgctcaacaagccgcagctcaagcccctgcgcaacaacaaaacaacggcagaaataat
aaacgtcgcaataaccaaaatcaaaaccagaatgcacaacaagcacccgttgctcaacag
gcacctgctgctcaagttgctgctcctgcagccagcccatgtgcatggttagaaaacctg
tttgtacaaaaacaggcggctactgttgatcaatctcgcactgccaataatgcagctgct
gcgattgaacaaatgatcaatggcggcgcggtaagtcgtggtcaattcggtcaagttgct
gcacctgttgctcaaccagcaccgcaacataccgctcaaccagcaccacaacctgctgct
gcaccaagcagtaatgcttatcttgcaccatccactgtggcgcataagccagagcgtgat
cttgctgaaaaagctgaacgtgaagaaaaatcacaacgcagccataaaaaacagcgcaac
aacaagcataaagagcagcgcgagccgcaacaacacgacaatgcaccgcaacaagtgcat
gaagaagtggttcagttgtctcgtcaggaacagcgtcaagaacaacgtgagcaaaagcgc
aagaatccgcgccatcagcaagagcacaatcaagatgcccaagctgaacagcaaactgct
gtaccacgtcgtgaccgtcgcaaccagcaacgcccagaacgaccaaatcgccaccgcgat
caaagcgtgctgaatgaacaggctgctgcacctcaagctcctgctgttgttgaagcacca
gctgctaacgaacagcaagtccgtgtagaattgattgatgcaccgcgtcaagacgttaca
ccaacagcaatggtggtaaatgtcgatcagggccaaagcgaaatcgtggcactgaacggt
actacacctgtagtggctgctcctactgaaactgcacctgaaaaggcgccagctgtagca
acaatggcagcagaactgaaagaaaaaactgaaacggttgatctgactgaagcccctgct
ccagcagcagcgcttgaacaggcaacgccgaaagctgaaaaagctcgtgccagcaatgac
ccacgtcaacgtcgtcgtgaccgtcgtgccgcacaaggccaacaggcttctcaagccgct
cagcttcgtccttcacaagtaccgaccctcggtcagtacactgtaggcagcctgatccgc
catgtatacggtgaagactgttcagtactgattgaacagttcggtctgatggcaactttc
aaccgtgcgctagacaagttcacgaagcaatataacgaaagtgttgttactgcagcgact
gccgagaaaaaaccggtaacgcgtgatgtggaagtgagtaaagcgcaaccagaaccagaa
ccagcgccggtactagatctgactccaccaaaaccggtatcagaaaagcgtgtagcaaac
gatccgcgtgagcgtcgtcgtttagctaaacttgctgctgaacaagcactggtacaagct
aaacaggctgctcagtcagaagaaaaaactgaacaggctgctcagtcagaagaaaaaact
gaacaggctgttgctgaaccagcagcagaagctcaagctgttgcagcacagtctgcagaa
actgtagaagtgctgaatgctgaacagccgacgaaagcaacacctgaacaggttgttgaa
gcagctgcggcacctactgaaacagaagcacctgctacggcagaaacagcaactgaagaa
gtcgcaccagcagctgaaaataccgctgaagcaactgaagtgaaagctgaaacagtggaa
acggaagcggaaaaggcagagaaatctcctgcccgtccacgtcgcccacgtggccgtcca
ccgaagaaagccaatactgcaactgagtcataa
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