Acinetobacter sp. LoGeW2-3: BS636_03865
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Entry
BS636_03865 CDS
T10253
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
acig Acinetobacter sp. LoGeW2-3
Pathway
acig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BS636_03865 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acig03019
]
BS636_03865 (pnp)
03016 Transfer RNA biogenesis [BR:
acig03016
]
BS636_03865 (pnp)
Enzymes [BR:
acig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BS636_03865 (pnp)
Messenger RNA biogenesis [BR:
acig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BS636_03865 (pnp)
Transfer RNA biogenesis [BR:
acig03016
]
Prokaryotic type
tRNA degradation factors
BS636_03865 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_2
KH-I_KHDC4-BBP
S1_RRP5
KH_N4BP1_2nd
KH_PNO1_2nd
OB_RRP5_4th
DUF7388
DUF3016
Motif
Other DBs
NCBI-ProteinID:
ATO18862
LinkDB
All DBs
Position
complement(796110..798203)
Genome browser
AA seq
697 aa
AA seq
DB search
MSMFNIVRKEFQFGQHQVVLETGRVARQANTVVITMGGVTVLVAVVAQPTAKAGQDFFPL
TVNYQEKQYAAGRIPGGYGKREGRQSEAETLISRLIDRPIRPLFPEGYYNEIQVTATVIS
SDKTMEADIAAMLGTSAALAIAGTPFRGPIGGARVGLINGEYVLNPNYEQMAQSDLDLVV
AGTESAVLMVESEAKELSEDQMLGAVLFGHDEMQIAIQAIKEFAAAAGAKESTWVAPTKN
EDLRAKLKEAFEAKISEAYTIAVKQDRYAALDAIQAEAVAQFVPENDETGIVDDLNELFE
DLKYRTVRDNILSGKPRIDGRDTKTVRALDVQVGVLDRAHGSALFTRGETQALVTTTLGN
TRDALMVDTLAGTKTDNFMLHYNFPAYSVGETGRESGPKRREIGHGRLARRGVQAVLPAA
DRFPYVIRIVSDITESNGSSSMASVCGASLSLMDAGVPIKAPVAGIAMGLVKEGERFAVL
SDILGDEDHLGDMDFKVAGSANGITALQMDIKIEGITEEIMEVALNQAYAGRMHILNAMN
QVISRARPEISMHAPTFQVITINPDKIRDVIGKGGATIRQITEETKAAIDIEDNGTVRVF
GETKAAAQAAIAKIQALTAEVEPGTIYTGKVIRIVEFGAFVNIMPGTDGLLHISQISNER
IANVADVLKEGQEVKVQVADVDNRGRIKLTMKDIEQA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtttaatattgttcgtaaagaattccagtttggtcagcaccaggtggttctt
gaaactggtcgtgttgcgcgccaggcaaatactgttgtaattactatgggcggcgtaaca
gtactggttgctgttgttgctcaaccaactgctaaagcaggtcaagacttcttcccactt
actgtgaactaccaagaaaagcaatatgctgcaggtcgtatcccaggtggttatggtaag
cgtgaaggccgtcagtctgaagctgaaactttaatttcacgtctgattgaccgtccaatc
cgtccattgttcccagaaggttattacaatgaaatccaggtaactgcgactgtaatctct
tctgacaaaactatggaagctgacatcgctgcgatgttaggtacttctgctgcacttgca
atcgctggtacaccattccgtggtccaatcggtggcgcacgtgttggtttgatcaacggt
gaatatgttcttaacccgaactacgagcaaatggctcagtctgaccttgatttagttgtt
gcaggtacagaatctgcagtattgatggttgaatctgaagcgaaagaactttcagaagac
caaatgctgggtgctgtattgttcggtcatgacgaaatgcaaatcgcgattcaagcgatt
aaagaatttgctgctgcagctggtgcgaaagaatcaacttgggttgctccaactaaaaac
gaagatcttcgtgcaaaactgaaagaagctttcgaagcgaaaatctcagaagcttataca
atcgctgttaaacaagaccgttacgcggctcttgatgcaattcaagcagaagcagttgct
caattcgttcctgaaaatgacgaaactggtatcgtagacgacttgaatgaattgtttgaa
gatctgaaataccgtacagtacgtgacaacattctatctggtaagccacgtattgacggt
cgtgataccaaaactgttcgtgcgcttgacgtacaagttggcgtattagaccgtgctcac
ggttctgcattgtttacacgtggtgaaactcaggcgttggtaacaacaactttgggtaac
actcgtgatgcgttgatggttgatacccttgcaggtacgaaaactgataacttcatgctg
cactataacttccctgcatactctgtgggtgaaactggtcgtgaatctggtcctaaacgt
cgtgaaatcggtcacggtcgtctggcgcgtcgtggtgttcaagccgttcttcctgcagct
gaccgcttcccgtacgtgatccgtatcgtatctgacatcactgaatctaacggttcatct
tcaatggcttctgtatgtggtgcttctctatcacttatggatgcaggtgtgccaattaaa
gcaccagttgcgggtatcgcaatgggtcttgtgaaagaaggtgaacgtttcgcagtgctt
tctgacatcttgggtgacgaagatcaccttggtgacatggactttaaagtagcgggttct
gcgaacggtattactgcacttcagatggatatcaaaatcgaaggtattactgaagaaatc
atggaagttgcattgaaccaggcttatgcaggtcgtatgcacatcctgaatgcaatgaac
caagtgatttcacgtgctcgtccagaaatctctatgcacgcgccgactttccaagtgatc
actattaaccctgacaagatccgtgacgtgattggtaagggtggtgcgactattcgtcaa
atcactgaagaaactaaagcagcgattgatatcgaagacaacggtacagtacgcgtattt
ggtgaaactaaagctgctgcacaagctgcgattgctaaaatccaggcgcttactgctgaa
gttgaaccaggtaccatctacactggtaaagtgattcgtatcgttgaatttggtgcgttc
gtcaatatcatgccaggtactgatggtctgctgcacatttctcaaatctctaacgagcgt
attgccaatgttgcagacgtattgaaagaaggtcaggaagtgaaagtacaggttgctgac
gttgacaaccgtggccgtatcaaattgacaatgaaagacatcgaacaagcataa
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