KEGG   Acinetobacter sp. LoGeW2-3: BS636_07990
Entry
BS636_07990       CDS       T10253                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
acig  Acinetobacter sp. LoGeW2-3
Pathway
acig03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:acig00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BS636_07990 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acig03021]
    BS636_07990 (rho)
   03019 Messenger RNA biogenesis [BR:acig03019]
    BS636_07990 (rho)
Transcription machinery [BR:acig03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     BS636_07990 (rho)
Messenger RNA biogenesis [BR:acig03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BS636_07990 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_22 AAA_25 S1CSD-TOTE-2 OB_RNB AAA GpA_ATPase
Other DBs
NCBI-ProteinID: ATO19599
LinkDB
Position
complement(1655563..1656831)
AA seq 422 aa
MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD
GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN
YDTPENSRNKILFENLTPLFPTEQLVMELGNGTTEDLTARVVDLVAPIGKGQRSIIVAPP
KAGKTMLLQNIAQSIVRNNPECFLIVLLIDERPEEVTEMERTVRGEVIASTFDESPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIISTALIETGSKMDEVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI
KKSGTRREERLMSEDNLRKVWILRKLLHTQDELAAMEFLLDRMKETKTNDDFFDQMKRKA
SN
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaatttaaccgaactcaagaaaaaaccgattggcgaactcatcaagattgccgagttt
atgggccttgaaggcatggcccgtaaccgtaagcaagacattatttttgccatcttaaag
cgccatgcgatgaatggcgaagagatttttggtgatggcgttttggaaattctgtcagat
ggttttggcttcttacgctctgcggcaggctcatatctggcaggtcctgatgacatctat
gtcagcccttcccagatccgtcgttttaaccttcgtacaggcgataccattactggtacc
attcgcccaccaaaagaaggtgaacgttattttgcactgttaaaagtgaaccaaattaac
tacgacacccctgagaactctcgtaacaagattctatttgaaaacttgaccccattattc
ccaactgagcaattggtgatggaattaggtaacggtacaactgaagacttgactgctcgt
gtggtcgacctggttgctccgattggtaaaggtcaacgttcgattatcgttgccccgccg
aaagccggtaaaaccatgttgttacaaaacatcgcgcagtcgattgttcgtaacaaccct
gaatgtttcctaattgtgcttctgattgacgaacgtcctgaagaagtaacagaaatggaa
cgtactgttcgtggtgaagtgattgcttctaccttcgatgaatcgcctgcccgtcacgta
caagtggctgaaatggtgattgaaaaagcgaaacgtctggttgaacacaagaaagatgta
gttatccttctcgactcaattacccgtctggcacgtgcttacaacactgttattccttca
tcaggtaaggtgttaactggtggtgttgatgcacatgcgcttgaacgtccaaaacgtttc
ttcggtgctgcacgtaatattgaagaagggggttcactgaccatcatttctactgcgctg
attgaaactggcagcaaaatggatgaagtgatctacgaagaattcaaaggtacaggtaac
caggaaattacccttgatcgccgcattgctgagaaacgcgtattccctgcaatgaacatc
aagaaatctggtacccgtcgtgaagaacgtctgatgtctgaagataatttgcgtaaggtt
tggattctgcgtaagctattgcatactcaagatgaattggcggcaatggaattcctgctg
gatcgcatgaaagaaaccaaaaccaatgatgacttcttcgatcagatgaagcgtaaagca
tctaactaa

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