Acinetobacter sp. LoGeW2-3: BS636_11380
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Entry
BS636_11380 CDS
T10253
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
acig Acinetobacter sp. LoGeW2-3
Pathway
acig02024
Quorum sensing
acig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BS636_11380
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BS636_11380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acig03019
]
BS636_11380
03036 Chromosome and associated proteins [BR:
acig03036
]
BS636_11380
Messenger RNA biogenesis [BR:
acig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BS636_11380
Chromosome and associated proteins [BR:
acig03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
BS636_11380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ATO20221
UniProt:
A0A2D1IRD5
LinkDB
All DBs
Position
2349691..2350212
Genome browser
AA seq
173 aa
AA seq
DB search
MSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAIS
TVVPARNPRPAGAPAGPQGAGFGGQGGFGGGQPGGFGGQGGFGGGQPGGFGGQGGFGGGQ
PGGFGGQGGFGGQGGGFGGQGGFGGGQPGFGGQGAGFTDDAKFEDSQDDENNR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggtcaaactttacaagatccgttcttgaattccctacgtaaagaacgtatt
cctgtttctatcttcctagttaacggtatcaaactacaaggtcatatcgaatcatttgat
caatatgttgtattattaaaaaatacagtaagccaaatggtttacaaacacgcgatttct
acagtagttcctgcacgtaacccacgcccagctggtgctcctgctggtcctcaaggcgct
ggctttggtggtcaaggtggcttcggcggcggtcaacctggcggcttcggtggtcaaggt
ggcttcggtggcggtcaaccaggtggtttcggtggtcaaggtggcttcggtggcggtcaa
cctggtggcttcggtggtcaaggtggcttcggtggtcaaggtggcggcttcggcggtcaa
ggcggcttcggtggcggtcaacctggtttcggtggtcaaggcgctggctttactgacgat
gcaaaattcgaagattctcaagatgacgaaaataatcgttaa
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