Acidianus sp. HS-5: HS5_11920
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Entry
HS5_11920 CDS
T07980
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
acih
Acidianus sp. HS-5
Brite
KEGG Orthology (KO) [BR:
acih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acih03400
]
HS5_11920
DNA repair and recombination proteins [BR:
acih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HS5_11920
Archaeal homologous recombinant proteins
HS5_11920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
AAA_15
AAA_21
AAA_13
AAA_29
SbcC_Walker_B
Occludin_ELL
MukB
ABC_tran
AAA_27
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
BDC18302
LinkDB
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Position
1084857..1087445
Genome browser
AA seq
862 aa
AA seq
DB search
MRIEKVILQNFLSHDNSEISFKGNINTIVGQNGAGKTSIIDGIVFSLFSESSRGNIKNLI
KKGKSTGIVQTEIRDGNITYLIKRDISSSSNDFVAKNDVGIARGRKEVDKKIQEILKLDK
DILLSTVIIRQGEIENIFKELPDVLKKILKVENLEKLTSSTGPLYAVQKDIESDLKYLDN
RKNEYENKIKEKENLEKEIEESKKKLEELDGIKVEREKEIEEKSTKFEEMKKKRDEYLGL
EGSLSSLIEREKLIERDLLRYDEIKNEKERLEKAIENSAYLEGGETLLNELHELKKSEKN
LLDQINILKEEIRDYEQNLAKKNSLKDAAEEYEKLSEKKKELENDYNEYISLRSLLSDKL
KRKEKLEKDIELIGNPPSLDEINKQIDNLEKEIDNLQNLKGTKEGRRDQLIQILRNLESV
KDNACPVCGRELTEEHKEKIKTEGESEIKEIDSDLEKIEKNLGKLKSKKKELSNLRVDTV
SKLTKLKKLNEDLDKISQELQDIQNKLNDLENSSREYLEIKGKITSLEPKYKEYLKVANY
DEKTLDDKKNRLNSISLNLNETQNKIKELLEKINDEREFEKKLKEYKKNKELLEKIKMEF
IRIENEKNELDKIKMNISEIKERITQINFNEDEFNALSREIDKLNNELINIEKEISNIEG
KINANSKLLETLNEEIKKIKEDLDKIPKLQTALNKIEKLRTILSGSRLQNYIMSIFKSRI
ENNLNDVLNMFNLSFSRVAINFDIGGRTQKGKVTIKAYNTAGDDLDIESLSGGERISIAL
ALRIAIAKSLMDETGFMIMDEPTIHLDEERKRELLNVIRYSMNIIPQIIIVTHDEEIKEI
SDYIISVTKKGDRSVISQGDYY
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgagaatagaaaaagtcatcttacaaaatttcttaagtcatgataattctgaaataagc
tttaaaggaaatataaacactatagtaggtcaaaatggagcgggcaaaacatcaataata
gacggtattgtattttcattattttcagagagttctagaggaaatataaaaaatttaatt
aaaaaaggtaaatcaacagggatagttcaaaccgaaattagagatggaaacataacatac
ttgataaagagagatatttcaagtagttctaacgattttgttgcaaaaaatgatgtaggt
attgcgagaggtagaaaagaagtagataaaaaaatccaagagatactgaagctagataag
gatattttactttctacagtaataataaggcaaggagaaattgaaaatatattcaaagaa
ttaccagatgttcttaaaaaaatactaaaagtggaaaacttagaaaaactgacttcctct
acaggacctctctacgctgtacagaaggatatcgagagcgacttaaaatacttagataat
agaaaaaatgaatatgaaaataagataaaagaaaaggaaaacttagagaaagaaatagaa
gaaagtaagaagaagctagaggaacttgacggtataaaagttgaaagagagaaggaaata
gaagaaaaatctactaaatttgaggaaatgaagaaaaagagggatgaatatctaggatta
gagggcagcctttcctctcttatcgaaagagaaaaattaatagaaagagatttattacga
tatgatgaaataaagaatgaaaaagaaagattagaaaaggcaatagagaatagtgcgtat
cttgaaggaggagaaaccttactgaatgagttacatgagttaaagaaatccgaaaagaat
ttgctagatcagataaacattcttaaggaggaaataagagattacgaacaaaatttagct
aaaaagaatagtttaaaggatgctgcagaagaatacgaaaagttatcagaaaagaaaaag
gagttagaaaatgattataacgaatatatttctttaagatctttacttagtgacaaatta
aaaagaaaagagaaattggaaaaagatatagagttgataggtaatccgccttctttggat
gaaataaataagcagattgataatttggaaaaagaaattgataacttacaaaatttaaaa
ggtacaaaggaaggtaggagagaccaattaattcagattttgaggaatttggaaagcgtt
aaagacaatgcttgtcctgtttgtggcagagaacttacagaagagcataaggaaaaaatt
aagacagaaggagagtctgaaattaaggaaattgatagtgatcttgagaagattgagaag
aatcttggaaagcttaaatctaagaaaaaagaactcagtaacttaagagtagatacagta
tctaagcttacaaaattaaagaaattaaatgaagatttggacaaaatatctcaagaattg
caagatattcaaaacaagcttaatgacctagaaaattcttccagagaatatttagaaatt
aaaggaaagataacctcattagagcctaaatataaagaatatctaaaagtagcaaattat
gatgaaaaaactctggacgataaaaagaatagactaaactccatttccttaaacctaaat
gagacgcaaaataagattaaagaattgttagaaaaaataaatgatgaaagagaatttgag
aaaaaattgaaagaatataagaaaaataaagaattgttagaaaaaataaaaatggagttc
ataaggattgaaaatgagaagaatgaactagataaaattaaaatgaatataagcgaaata
aaggaaagaattacacaaattaattttaatgaggacgagtttaatgcgttaagcagagaa
attgataaacttaataatgaactaataaacatagaaaaagaaatatcgaatattgaaggc
aaaataaacgctaacagtaaattgctggagacactaaacgaggaaattaagaagataaag
gaagatctagataaaattcctaaattacaaacagctctaaataaaattgaaaaattaagg
acaatacttagcggaagtagactgcagaattacattatgtcaatatttaaatctagaata
gaaaataatctaaatgatgtattaaatatgtttaatctgtcgttctcaagagttgctatt
aattttgatataggtggcaggacgcaaaaaggtaaggttacaattaaagcttataatact
gcaggggatgatctagatattgaatcattaagtggcggagaaaggatatctattgcgcta
gctttaaggatagcaattgcaaagtccttaatggatgaaacaggcttcatgataatggac
gaacctacaattcatttagatgaggaaagaaagagagaactactaaatgttattagatat
tctatgaatataatcccacaaataattatagttactcacgatgaggaaattaaggaaatc
tcagattatatcatttcagtaactaagaaaggagatagaagtgtaataagtcaaggtgac
tattattga
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