Acidianus sp. HS-5: HS5_13350
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Entry
HS5_13350 CDS
T07980
Name
(GenBank) radical SAM protein
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
acih
Acidianus sp. HS-5
Brite
KEGG Orthology (KO) [BR:
acih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acih03016
]
HS5_13350
Enzymes [BR:
acih01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
HS5_13350
Transfer RNA biogenesis [BR:
acih03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
HS5_13350
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_1
Acetyltransf_10
Acetyltransf_7
Motif
Other DBs
NCBI-ProteinID:
BDC18445
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Position
1212950..1214356
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AA seq
468 aa
AA seq
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MLKKPVRTISGVAPVSIMSHPHRCPHGKCIFCPGGVEYNTPQSYYGKEPTLMRAIENNFD
PYYQVRSRLEQYFNNGHFPNKVELIIMGGTFLSLPLDYQEWFVTNALEAMNNFPKKKKSG
FVYLEDAQLRNETAQIRCVGMTIETKPDWGKEWHADQMLRLGATKVELGVQTVYDDLLKK
VNRGHTVKDNVESTRILKDSGFKIVYHMMLGLPGSDPDKDLEALKEIFTNPDFRPDMLKI
YPTLVVETAPLAELWKRGLYTPYDTNTLVEIISEAYRYMPKWVRIMRIQRDIPANIILAG
NKKGNLRELVERRVKEKGIEIKEIRYREVGIAWLHRKIRPDSISLHKEVYEASGGTEVFL
SFESDNGLIVGYLRLRKPANSHRKEINERTTIVRELHVYGEEVPIGEKKDEAYQHRGYGS
ALLKEAERISSEEFDAKKILVLSGIGAREYYKQKGYTRCGPYMAKQLA
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
gtgcttaaaaaaccagttagaacaatttcgggagttgctccagtttctataatgtctcat
ccgcatagatgtcctcatggtaaatgtattttctgtcctggaggtgttgaatataatacc
cctcaaagttactacggcaaagagcctactttaatgagagcaatagagaacaattttgac
ccttactatcaggttaggtcaaggttagaacagtattttaataatggtcattttccaaat
aaagttgaattaataataatgggtggaacgtttctttctttgcctttagattatcaagaa
tggttcgttactaacgcattagaggcaatgaacaatttccctaaaaagaagaagagtggt
tttgtatatttggaagatgctcaattgaggaatgagacagcgcagattagatgtgttgga
atgactatagagactaaacccgattggggcaaagagtggcatgcagatcaaatgcttaga
cttggagctactaaagttgagctgggagttcagactgtttacgatgatttattaaaaaag
gttaataggggacatacagttaaggataacgtagaatctacaagaatactgaaagattct
ggttttaagatagtttaccacatgatgttaggtttaccaggctcagatcctgataaagat
ttagaggcattaaaagaaatttttactaatccggatttcagaccggatatgttaaaaatc
tatcctactttagtagttgaaacagcgcctttagccgaattgtggaaaagagggctttat
actccttatgatactaacactttagttgaaataatttccgaagcttaccgttatatgccg
aagtgggtaagaataatgaggatacagcgcgatatacctgcaaatatcatattagccggt
aataaaaaaggcaatttaagagaactagtagagaggagagttaaagagaaaggaatagaa
attaaagaaataagatatagggaagtcggaatagcatggttacatagaaaaatcagacca
gatagtatatcattacataaggaagtttacgaagcaagcggaggtaccgaagttttcctt
tcatttgaaagtgataacggtctcatagtaggttatttaaggttaagaaagcctgcaaat
tctcataggaaagagataaacgagagaactactattgtaagggaactacacgtatatgga
gaagaagttccaataggagagaaaaaggatgaggcctatcagcacagaggctatggatcg
gccttacttaaagaggcggaaagaatctcgtcagaggaatttgacgctaaaaagattcta
gtgctttccggcattggagcaagggagtattataagcaaaaaggatacactaggtgcggg
ccttatatggctaagcagttagcatag
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