Acidianus sp. HS-5: HS5_13480
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Entry
HS5_13480 CDS
T07980
Symbol
tfb_1
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
acih
Acidianus sp. HS-5
Pathway
acih03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acih00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HS5_13480 (tfb_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acih03021
]
HS5_13480 (tfb_1)
Transcription machinery [BR:
acih03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HS5_13480 (tfb_1)
Prokaryotic type
Archaeal type
TFB
HS5_13480 (tfb_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Cyclin_N
BRF2-like_C_cyclin_rpt
Rossman_Mical
HTH_AsnC-type
RB_B
Sigma70_r4
DUF6398
Motif
Other DBs
NCBI-ProteinID:
BDC18458
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All DBs
Position
1225752..1226627
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AA seq
291 aa
AA seq
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MSSEIICPKDKIVFDANRGEYICTETGEVLEDKVVDQGPEWRAYTEEENRERSRAGTINL
AVHDMGLSTYMDVKAKDRIKAMRLRKLQIRSRVGTSEQRNLVKAMTILERIIDNLGLPKA
VKEEAAIIYRKALDKKLIKGRSIEEVVAASVYAACRKLNIPTTLDEITKITSANKKEIGK
AYRLLLREDVTEVPASDPKYYVMKIASLLGLSGKVMTAAMEIVERAKKAGITSGKDPASI
AAAAVYIAANINGERRSQREISEVSGVTQVTIRNRYREIARELGIDIEGIN
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgaaataatatgcccaaaggataaaatagtctttgacgctaataggggggag
tacatctgtacagagactggagaagtcctagaagataaagttgtcgatcaaggaccagag
tggagagcttatactgaggaagaaaacagggagagaagcagagcaggtacgattaactta
gcagttcacgatatggggctttcaacttacatggatgtaaaggctaaagatagaataaag
gcaatgaggttaaggaaattacaaataaggtcaagagtgggaacctcagagcagagaaac
ctagtcaaggcaatgactatccttgagaggattatagataacttaggcttaccaaaagct
gtaaaagaagaggccgcaattatttacaggaaagctttagataaaaaattaataaaaggt
aggagcatcgaggaagtagttgctgcctcagtttatgctgcttgtaggaagttgaatatt
ccaactacattagatgaaataactaaaataacatctgcgaataaaaaagagataggaaaa
gcttataggctcttgttaagggaagatgttactgaagttcctgccagtgaccctaagtac
tacgtcatgaagatagcctcattactaggactcagcggtaaagtgatgactgctgccatg
gaaatagtggaaagagctaagaaagctggaataacttctggaaaagatcctgcaagtatt
gcagctgctgcagtatatatcgcggcaaatatcaacggagagagaagatcccagagggaa
atttctgaagtctctggagtaactcaagtgactataaggaataggtatagggaaatagcc
agagaattaggaatagacatagaaggaataaactaa
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