Acidianus sp. HS-5: HS5_20470
Help
Entry
HS5_20470 CDS
T07980
Name
(GenBank) mRNA surveillance protein Pelota
KO
K06965
protein pelota
Organism
acih
Acidianus sp. HS-5
Pathway
acih03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acih00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HS5_20470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acih03019
]
HS5_20470
Messenger RNA biogenesis [BR:
acih03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
HS5_20470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Glyco_trans_A_1
Motif
Other DBs
NCBI-ProteinID:
BDC19157
LinkDB
All DBs
Position
1897352..1898368
Genome browser
AA seq
338 aa
AA seq
DB search
MKVLEFDEKKGTMKVHVEDEDDLWTLHMILNKGDRVVARTFRDVSMGNEGRRVSMIIELQ
VEYTEFQAFTTRLRIHGIILDAPEKYSIKGAHHTVNLDIGDEIIIVKDKWNKSVLDRIYK
QAEKKNRVLIALVDFDEYLIAMPMIQGIKILVEKSLSTPTKEEGIIEDNAKEVVNEIQSY
LNIYNNIDAILIAGPGPFKEIVRKYLNTKVKVYMDSVSSATESGLNEVLKRDIIDQIMRD
YEISQSEKDLDRALMLLNKDSSLIAYGIEETKKASDYSAVDSLLVIEDLVTENEEVQNIM
EEVEKTGGKVHIIPKDSPIYFQVKNFAGILAILRFRID
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtattggaatttgatgagaaaaaaggtactatgaaagtccatgtagaggatgaa
gacgatctatggaccctgcacatgattttaaataaaggggatagagtagtagcaagaact
ttcagagacgtaagtatgggtaacgagggaagaagagtttcaatgattatagagttacaa
gtagaatatacggaatttcaagcttttactacaaggttaagaatacatgggataattcta
gacgcaccagaaaagtatagcataaagggtgcacatcatacggtaaatctggatatagga
gatgaaataataattgtgaaagataagtggaataaaagtgtcttggacagaatttacaaa
caagctgaaaagaaaaacagagttttaatagctttagtagactttgatgaatatttaata
gctatgccgatgattcaaggtataaaaatacttgtggaaaagagtctatcaacccctacg
aaggaggagggaataatagaagataatgcaaaagaagtagtaaatgaaattcagagttat
ctaaatatatataataatatagatgcaattttaatagctggacctggtccgtttaaggag
attgtgagaaaatacttaaatacgaaagtaaaggtttacatggattccgtttcttccgca
acagagtctggattaaatgaagtattaaaaagggatataatagatcaaattatgagagat
tacgaaatttcgcaatcggaaaaagatcttgacagagctttaatgttactaaataaagat
tccagtcttatagcttacggaattgaagagactaaaaaagcttcagattatagtgcagtt
gactctctactagttatagaagatttggtgactgagaatgaagaagtacagaatataatg
gaagaagtagagaaaactggaggaaaagttcacataatacctaaagactctccaatttat
ttccaagtaaaaaattttgcagggatcttagctattcttagatttagaatagattaa
DBGET
integrated database retrieval system
