Acidianus sp. HS-5: HS5_20560
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Entry
HS5_20560 CDS
T07980
Symbol
tfb_2
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
acih
Acidianus sp. HS-5
Pathway
acih03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acih00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HS5_20560 (tfb_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acih03021
]
HS5_20560 (tfb_2)
Transcription machinery [BR:
acih03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HS5_20560 (tfb_2)
Prokaryotic type
Archaeal type
TFB
HS5_20560 (tfb_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
HTH_AsnC-type
Cyclin_C
HTH_24
BRF2-like_C_cyclin_rpt
HTH_Crp_2
TMP_3
HTH_36
HTH_Tnp_ISL3
Sigma70_r4_2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BDC19166
LinkDB
All DBs
Position
1905023..1905937
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AA seq
304 aa
AA seq
DB search
MSDKPQDNICPPDKIVFDADRGEYICTETGEVIEERIIDQGPEWRAFTPEEKEKRSRVGG
PLNQTIHDRGLSTLIDWKDKDAIGRNLDPKRRLEVLRWRKWQIRARIQSSIDRNLAQAMN
ELERIGNLLGLPKSVKDEAALIYRKAVEKGLVRGRSIESVVAASIYASCRRIKIARTLDE
IAQYTKANRKEVARCYRLLLRELNVEVPVSDPKDYVTRIGSLLSLSGATMKLAAEILEKA
KNAGLTAGKDPAGLAAAAIYIAALMNDERRTQKEIAQVAGVTEVTVRNRYKELIQELKIE
IQNQ
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataaacctcaagataacatttgtcctccggataaaatagtttttgatgcagac
agaggagaatacatatgcacagaaactggtgaagttattgaggaaagaattattgatcag
ggccccgaatggagggcatttactcctgaagaaaaagagaagagaagtagagttggcggg
cctctaaatcaaactattcatgatagaggattatctacacttatagattggaaggataag
gatgcaataggaagaaatttagatcctaagagaaggttagaagtgttaagatggagaaag
tggcagataagagctagaattcaatcatctattgatagaaatcttgcgcaagcaatgaac
gagttggaaagaataggcaacttactgggattacctaaatcagttaaagatgaggctgca
ctcatatatagaaaagctgtagaaaaaggattggtaagaggtagatctatagaaagcgta
gtagcagcgtccatttacgcatcatgtaggagaattaagatagctaggacattagatgaa
attgcacagtacactaaagcaaataggaaagaagttgccagatgttaccggttattatta
agagagcttaatgttgaagtcccagtatcagatcctaaggattatgtaactaggatagga
tccttattgagtcttagtggcgctacaatgaagctagctgcagagatactagaaaaagct
aagaatgcaggtttaacagcaggaaaagatcctgcgggtttagctgctgctgcgatatat
attgcagcattaatgaatgatgaaaggagaactcaaaaagagatagctcaagtagcggga
gttacagaagtaactgtaaggaatagatataaggagcttatacaagaattaaaaatagag
atacaaaatcaataa
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